Escherichia coli SMS-3-5 (environmental): EcSMS35_4022
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Entry
EcSMS35_4022 CDS
T00672
Name
(GenBank) putative type III effector protein SipD
KO
K13287
invasin D
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
EcSMS35_4022
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecm02000
]
EcSMS35_4022
Transporters [BR:
ecm02000
]
Other transporters
Pores ion channels [TC:
1
]
EcSMS35_4022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T3SS_TC
DUF445
Motif
Other DBs
NCBI-ProteinID:
ACB18873
UniProt:
B1LKY2
LinkDB
All DBs
Position
4100889..4102238
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AA seq
449 aa
AA seq
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MINKDNNLNIDILRQQNANIPLQEASSQSEEPHQLENSKSEGNLHNSASKDNNIGAMLKK
DVEKLSTLVSERSPRNEDWKCQHDIQLNFVKNMLRNFPTENLSEKGSALLHESYSLIKNV
LQLTENVNTIDGKLKDPAKILTLHNSVRKTLANVAHNTTGSSAMASTKGTLNHAIASLES
SAPEMRSSATSSTLTASSSNEFKSDKYICSDIADLMSVLGSDYLEIYANSVEIMSAYWQD
FSEHIQSNMGKWTHSNKKGDAIVFDVNAFQKALMHFYYIDKYPNGDFHYHYNPDYVLYPP
APADKIGVPLEEAEKWYAALGLPVIPPDPKHRTPSPIVEVEPQGSGLYVIIPNPQIIDSM
SQSSDSMVHRDDKGKEKNISKEFTGYEISTAEYQAWLAGYNGQAENMKTDVQVITTKYST
ANSTYDTIIKLLSSTITALFDSAKDYLRF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgattaataaagataataatttaaatatagatattctacgtcagcagaatgcaaacatt
cctcttcaagaggcatcctcgcaaagtgaggagcctcatcaactggaaaacagcaaaagc
gagggtaatttgcataacagcgccagtaaggataataatattggcgctatgctcaagaaa
gatgttgaaaaactatcaactttagtcagtgaacgtagcccgcgaaatgaagactggaaa
tgccagcatgacatacagcttaacttcgttaaaaacatgctcagaaatttcccaactgag
aacctgtcagagaaaggatctgcgctcttacacgaaagttattcgctgataaaaaacgtt
ctgcagcttacagaaaatgttaatactattgacggaaaattaaaggatcccgctaaaata
ttgaccttgcataactctgtgagaaaaaccctggctaacgttgctcacaacacaaccggg
tcaagtgcaatggcatcgaccaaaggtaccttaaatcacgctatcgcttctttagagagt
tctgcgcctgaaatgagaagttcagcaaccagcagtactttaacggccagtagttcaaac
gaatttaaaagtgataaatatatatgcagtgatattgctgatttgatgagtgtgctcggt
agcgactacctcgaaatctatgcaaatagcgttgagataatgagcgcatactggcaggac
ttcagtgaacatatccaaagcaatatgggaaaatggactcactctaataaaaaaggcgat
gcgatagtttttgacgtcaatgcattccaaaaagccttgatgcatttttattatatcgat
aaatatcctaatggtgatttccactatcattacaatccagactatgttttataccctccg
gcacctgctgacaaaattggtgtaccactagaagaagcagaaaaatggtacgccgcttta
ggacttccggtaattccacccgatcccaaacaccgcacaccttctccgattgtcgaagtt
gaaccgcaaggtagcggtctgtatgttattattcccaaccctcagattattgacagtatg
agtcagtcttcagactcaatggtgcatagggacgataaagggaaggaaaaaaatatatct
aaagaattcaccggttatgaaataagcacagctgaataccaggcatggctggcgggttat
aacggccaggcagaaaacatgaaaaccgacgtgcaggttatcacgactaaatacagtaca
gccaactccacctacgatacaattatcaaattattatcttcaaccattactgcgttgttt
gattcagcgaaagattatttacgtttctga
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