Escherichia coli SMS-3-5 (environmental): EcSMS35_4073
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Entry
EcSMS35_4073 CDS
T00672
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecm03016
]
EcSMS35_4073 (trmE)
Transfer RNA biogenesis [BR:
ecm03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
EcSMS35_4073 (trmE)
Prokaryotic type
Methyltransferases
EcSMS35_4073 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
RsgA_GTPase
AIG1
ABC_tran
Roc
Arf
AAA_28
SRPRB
Gtr1_RagA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ACB17004
UniProt:
B1LL33
LinkDB
All DBs
Position
4163496..4164860
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AA seq
454 aa
AA seq
DB search
MSDNDTIVAQATPPGRGGVGILRISGLKAREVAETVLGKLPKPRYADYLPFKDADGSVLD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPGLRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL
FMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETLGMSEVNGHALIRLSAR
TGEGVDVLRNHLKQSMGFDTNMEGGFLARRRHLQALEQAAEHLQQGKAQLLGAWAGELLA
EELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataatgacactatcgtagcccaggccacgcctccgggacgtggcggcgttggc
atcctgcgcatctccggcctcaaagcccgtgaggttgccgaaaccgtgctgggtaaactg
ccaaagccgcgctacgccgattatcttccgtttaaagacgccgacggcagcgtgctcgat
caggggattgcgctatggttccctggcccgaactcgttcaccggcgaagatgtgctggaa
ctgcaaggtcatggcggtccggtgatcctcgacctgctgttaaaacgcattctgaccatt
cccggcctgcggattgcccgccctggtgagttttccgaacgcgcatttctgaacgataaa
ctcgacttagcccaggccgaagcgattgctgatcttatcgacgccagctcggaacaggcg
gcccgttcggcgctaaactcgctgcaaggcgcattctccgcacgggtcaaccatctggtg
gaagccctcacccacttgcgcatttacgtcgaagcggcaattgatttcccggatgaagag
atcgatttcctctccgacggcaaaattgaagcccagctcaatgacgttattgccgatctt
gatgcagtgcgtgctgaagcacgtcagggtagtttgttgcgcgaagggatgaaagtggtg
attgccggacgtcctaacgccggtaaatcgagcctgttaaacgcgctggcgggccgtgaa
gcggcaatcgtaaccgatatcgccggaaccacgcgtgacgtgctgcgtgagcatatccac
attgacggaatgccgctgcatatcatcgataccgccgggctacgtgaagccagtgacgaa
gtggaacgtattggtatcgagcgcgcgtggcaggaaattgaacaggccgaccgcgtgctg
tttatggtcgatggcaccacgacagacgccgttgatccggcagagatctggccggaattt
atcgcccgtctgccagcgaaactgccgatcaccgtggtgcgcaataaagccgatatcacc
ggcgaaacgttggggatgagcgaagtgaacggtcatgcgttaattcgtctttcggcgcgg
actggcgaaggcgtggatgtgctgcgtaaccatctcaaacagagcatgggctttgacacc
aatatggaaggcggcttcctggcgcgtcgtcgtcacctacaggcgctggaacaggcggca
gagcatttgcagcaaggtaaagcgcaactgttgggtgcctgggcgggtgaactgctggcg
gaagagttgcgcctggcgcagcagaacttaagcgaaatcaccggggagtttacttcagac
gacctgcttgggcggattttctccagcttctgtattggtaagtaa
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