Escherichia coli SMS-3-5 (environmental): EcSMS35_4189
Help
Entry
EcSMS35_4189 CDS
T00672
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EcSMS35_4189 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecm03019
]
EcSMS35_4189 (recQ)
03400 DNA repair and recombination proteins [BR:
ecm03400
]
EcSMS35_4189 (recQ)
Enzymes [BR:
ecm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EcSMS35_4189 (recQ)
Messenger RNA biogenesis [BR:
ecm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EcSMS35_4189 (recQ)
DNA repair and recombination proteins [BR:
ecm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EcSMS35_4189 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ACB16757
UniProt:
B1LLZ4
LinkDB
All DBs
Position
4287169..4289004
Genome browser
AA seq
611 aa
AA seq
DB search
MNVAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQ
IPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAVCLNSTQTREQQLEVMTGCRTGQIRL
LYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFM
ALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKS
GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGM
GINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQG
QLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQI
ALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIH
LGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAK
LRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMAL
IRAHVDGDDEE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgtggcgcaggcggaagtgttgaatctggagtccggggctaaacaggttttacaa
gaaacctttggctaccaacagtttcgccccggccaggaagaaattatcgacactgtgctt
tccggccgcgattgcctcgttgtcatgcccactggtggcggaaaatccctttgctatcaa
atccctgccttattgctaaacggccttaccgtggttgtttcaccgctgatttcgttgatg
aaagatcaggtggatcaactgcaagccaacggcgtggcggcggtgtgccttaactcgacg
caaacccgcgagcagcaacttgaagtgatgacaggctgtcgcaccgggcaaatccgcctg
ctttatatcgcgccggaacgcctgatgctggataactttcttgagcatctggcgcactgg
aatccggtgttattagccgttgatgaagcgcactgtatctcccaatggggtcacgatttc
cgcccggaatacgctgccctcggtcagctgcgtcagcgttttccgacgctgccgtttatg
gcgctgactgccacagccgatgacaccacgcgccaggatatcgtgcgcctgctggggctg
aacgatccgctgattcaaatcagcagttttgatcgtccgaatattcgctacatgctgatg
gagaagttcaaaccgctcgatcagttgatgcgctacgtgcaggaacagcgcggtaagtcc
ggcattatctactgcaacagccgggcgaaagtagaagacaccgctgcgcgcctgcaaagc
aagggtattagcgcggcggcctatcatgccgggctggaaaataatgtccgcgccgacgtg
caggaaaaatttcagcgcgatgacctgcaaattgtggtggcgaccgtggcgtttggcatg
ggcatcaacaagcctaacgtccgcttcgtggtccactttgatattccgcgcaatatcgaa
tcctattatcaggaaaccggtcgcgccgggcgtgatggcctgcccgcggaagcgatgctg
ttttacgatccggccgatatggcgtggctacgccgttgtctggaagagaagccgcagggg
caattgcaggatatcgagcgccataaactcaatgcgatgggcgcgtttgccgaagcgcaa
acttgccgtcgtctggtgctgctgaactactttggcgaagggcggcaggagccgtgcggg
aactgcgatatctgcctcgatccgccgaaacaatacgatggttcaaccgatgctcagatt
gccctttccaccattggtcgtgtgaatcagcggtttgggatgggctatgtggtggaagtt
attcgcggtgctaataatcagcgtatccgcgactatggtcatgacaaactgaaagtctat
ggcatgggccgtgataaaagccatgaacattgggtgagcgtgatccgccagctgattcac
ctcggcctggtgacgcaaaatattgcccagcattctgccctacaactgacagaggctgcg
cgtccggtgctgcgcggcgaatcctctttgcaacttgccgtgccgcgtatcgtggcgctc
aaaccgaaagcgatgcagaaatccttcggcggcaactatgatcgcaaactgttcgccaaa
ttacgcaaactgcgtaaatcgattgccgatgaaagcaatgtcccgccgtacgtggtgttt
aacgacgcaaccttgattgagatggctgaacagatgccgatcaccgccagcgaaatgctc
agcgttaacggcgttgggatgcgcaagctggaacgctttggtaaaccgtttatggcgctt
atccgcgcgcatgtcgatggtgacgacgaagagtag
DBGET
integrated database retrieval system
