Escherichia coli SMS-3-5 (environmental): EcSMS35_4524
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Entry
EcSMS35_4524 CDS
T00672
Symbol
soxS
Name
(GenBank) regulatory protein SoxS
KO
K13631
AraC family transcriptional regulator, mar-sox-rob regulon activator
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecm03000
]
EcSMS35_4524 (soxS)
Transcription factors [BR:
ecm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
EcSMS35_4524 (soxS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ACB17485
UniProt:
B1LPM7
LinkDB
All DBs
Position
complement(4624648..4624971)
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AA seq
107 aa
AA seq
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MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL
LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatcagaaaattattcaggatcttatcgcatggattgacgagcatattgaccag
ccgcttaacattgatgtcgtcgcaaaaaaatcaggctattcaaagtggtacttacagcgg
atgttccgcacggtgacgcatcagacacttggtgattacattcgccaacgccgcctgttg
ctggccgccgttgagttgcgcaccaccgagcgtccgatttttgatatcgcaatggacctg
ggttatgtctcgcagcagaccttctcccgcgttttccgtcggcagtttgatcgcactcca
agcgattatcgccaccgcctgtag
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