Escherichia coli SMS-3-5 (environmental): EcSMS35_4525
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Entry
EcSMS35_4525 CDS
T00672
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecm03000
]
EcSMS35_4525 (soxR)
Transcription factors [BR:
ecm03000
]
Prokaryotic type
Helix-turn-helix
MerR family
EcSMS35_4525 (soxR)
SSDB
Ortholog
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GFIT
Motif
Pfam:
MerR-DNA-bind
MerR
MerR_1
HTH_17
HTH_3
DUF2670
TPP_enzyme_M
NinG
Motif
Other DBs
NCBI-ProteinID:
ACB16848
UniProt:
B1LPM8
LinkDB
All DBs
Position
4625057..4625521
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AA seq
154 aa
AA seq
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MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLISSIRNSGNQRRYKRDVLRYVAII
KIAQRIGIPLATIREAFGVLPEGHTLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCI
GCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaattaccccgcattaaagcgctgctaacccccggcgaagtggcaaaacgc
agcggtgtggcggtatcggcgctgcatttctatgaaagcaaagggttgattagcagtatc
cgtaatagtggcaatcagcggcgatataaacgtgatgtgttgcgatatgtcgcaatcatc
aaaattgctcagcgtattggcattccgctggcgaccattcgtgaagcatttggcgtgttg
cccgaagggcatacattaagtgcgaaagagtggaaacagctttcgtcccaatggcgagaa
gagttggatcggcgcattcataccttagtggcgctgcgtgacgaactggacggatgtatt
ggttgtggctgcctttcgcgcagtgattgcccattgcgtaacccgggcgaccgcttagga
gaagaaggcacaggcgcacgcttgctggaagatgaacaaaactaa
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