Escherichia coli SMS-3-5 (environmental): EcSMS35_4633
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Entry
EcSMS35_4633 CDS
T00672
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EcSMS35_4633 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecm03019
]
EcSMS35_4633 (orn)
03009 Ribosome biogenesis [BR:
ecm03009
]
EcSMS35_4633 (orn)
Messenger RNA biogenesis [BR:
ecm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EcSMS35_4633 (orn)
Ribosome biogenesis [BR:
ecm03009
]
Eukaryotic type
Pre-60S particles
RNases
EcSMS35_4633 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ACB17851
UniProt:
B1LQI5
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All DBs
Position
4736265..4736810
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AA seq
181 aa
AA seq
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MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD
WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaatgaaaacaacctgatttggatcgatcttgagatgaccggtctggatccc
gagcgcgatcgcattattgagattgccacgctggtgaccgatgccaacctgaatattctg
gcagaagggccgaccattgcagtacatcagtccgatgaacagctggcgctgatggatgac
tggaacgtgcgcacccataccgccagcgggctggtggagcgcgtgaaagcgagcacgatg
ggcgatcgtgaagctgaactggcaacgctcgaattcttaaaacagtgggtgcctgcggga
aaatcgccgatttgtggtaacagcatcggtcaggaccgtcgcttcctgtttaaatacatg
ccggagctggaagcctacttccactaccgttatctcgatgtcagcaccctgaaagagctg
gcgcgccgctggaagccggaaattcttgatggttttaccaagcaggggacgcatcaggcg
atggatgatatccgtgaatcggtggcggagctggcttactaccgcgagcattttatcaag
ctgtaa
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