Escherichia coli SMS-3-5 (environmental): EcSMS35_4744
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Entry
EcSMS35_4744 CDS
T00672
Name
(GenBank) conserved hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecm03400
]
EcSMS35_4744
DNA repair and recombination proteins [BR:
ecm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
EcSMS35_4744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_10
TrwB_AAD_bind
ResIII
AAA_16
FtsK_SpoIIIE
SLFN-g3_helicase
AAA
T2SSE
AAA_30
AAA_7
Hydrolase
AAA_19
CbiA
AAA_18
SRP54
AAA_28
NTPase_1
ORC-CDC6-like
AAA_25
nSTAND3
AAA_6
Motif
Other DBs
NCBI-ProteinID:
ACB16984
UniProt:
B1LRE9
LinkDB
All DBs
Position
complement(4843468..4844970)
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AA seq
500 aa
AA seq
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MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVK
GDLTGVEQAGTASEKLLARLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLL
ARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASV
GAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLL
WMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFV
SQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGE
ALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDEVDRESAYEM
LQKGFQASTEQQNNPPVKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAAR
QVTNQIVRGMLGSLLGGRKR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccctgttaattgcccgcacgccggacacagaactgtttttactgccggga
atggctaaccgtcacgggctgattactggcgcaacggggacgggtaaaactgtcacgttg
caaaaactggcagagtcattgtcggaaatcggtgttccggtgtttatggccgatgtgaaa
ggcgatctgaccggcgtcgagcaggcaggaacggcgtcggaaaaactgctcgcaaggctt
aaaaatatcggcgtcaatgactggcaaccgcatgccaatccggtggtggtgtgggatatc
tttggcgagaaaggccatccggtgcgggcgacggtttcggatctggggccgctgttgctg
gcacgactgttgaatctcaacgatgtgcaatctggcgtgctgaatatcattttccgcatt
gctgacgatcagggattgttgctgctcgactttaaagatctgcgggcaattacccagtac
atcggcgataacgccaaatccttccagaatcagtacggaaatatcagtagcgcatcggtt
ggtgccatccagcgcggattactgtcgctggaacagcaaggcgcagcacacttctttggt
gagccgatgctggatatcaaagactggatgcgcaccgatgccaacggtaaaggcgttatc
aatatcctcagcgccgagaaactttatcagatgccgaaactgtacgccgccagcctgctg
tggatgctttcagaattgtatgaacaattgcctgaagcgggcgatctggagaaaccaaaa
ctggtgtttttcttcgacgaggcacatctgctgtttaacgatgcaccgcaggtactgctg
gataagattgagcaggtgataaggcttattcgctcaaaaggcgtgggcgtctggttcgtt
tcgcaaaacccgtctgatattccggataatgtgctcgggcagctaggtaatcgcgttcag
cacgctttgcgggcttttacgccaaaagatcagaaagcagtgaaggcagcggcgcaaacc
atgcgggccaatccggcatttgataccgaaaaggcaatccaggaactggggaccggcgag
gcgttaatctcgtttctcgatgcaaaaggaagtccttctgtggtggaacgggcgatggtg
atcgcaccttgttcgcgaatggggccggtgacggaagatgagcgtaatggcctgattaat
cactctccggtgtatggcaaatatgaagatgaggtggaccgcgagtccgcctatgagatg
ctgcaaaaaggctttcaggccagtaccgagcagcaaaataatccccccgtgaaaggtaaa
gaggtggcggtggatgacggtattcttggtggattgaaggatattttgtttggcactacc
ggaccacgcggcgggaagaaagatggtgtggtgcaaacaatggcgaaaagcgccgctcgc
caggtgacgaatcagattgtacgcgggatgttggggagtttgctgggggggagaaaaagg
taa
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