Escherichia coli SMS-3-5 (environmental): EcSMS35_4786
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Entry
EcSMS35_4786 CDS
T00672
Name
(GenBank) H-NS histone family protein
KO
K03746
DNA-binding protein H-NS
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecm03036
]
EcSMS35_4786
03400 DNA repair and recombination proteins [BR:
ecm03400
]
EcSMS35_4786
Chromosome and associated proteins [BR:
ecm03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
EcSMS35_4786
DNA repair and recombination proteins [BR:
ecm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EcSMS35_4786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS
Histone_HNS_N
DAXX_hist_bd
Swi5
EspA
DUF5930
zf-CRD
Motif
Other DBs
NCBI-ProteinID:
ACB17596
UniProt:
B1LDK0
LinkDB
All DBs
Position
complement(4879662..4880102)
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AA seq
146 aa
AA seq
DB search
MSKKKFSVENEDLSTVRTSLLNSNLVRKLIMEMSDEDFNQVKDNLEKAIEQRNELKDSLA
IIKKYMDDAGVTAEDVYREFGKKLQTGRKNDSGESNKYRYEYNGQIMYWSGQGRRPSVIA
EAIKAGGSLDDFLISQGTSSSCSDYE
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaagaagttttctgttgagaatgaagatctctctactgttcgtacatcactt
cttaattccaaccttgtccggaagttgatcatggaaatgtctgatgaagacttcaatcaa
gttaaggataaccttgaaaaggccattgagcagcgtaatgagttgaaggattctttggca
attatcaaaaagtacatggatgacgcaggtgtaacggcggaagatgtgtatcgtgaattt
ggcaaaaaattacagacgggcagaaaaaacgattcaggagagtctaataagtacaggtat
gagtataacggtcaaataatgtactggagtggacaaggtcgtcggccttctgttattgca
gaagcaataaaagccggaggttctcttgatgattttcttatatctcagggcacatcatca
tcttgttctgattatgagtga
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