Escherichia coli SMS-3-5 (environmental): EcSMS35_4830
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Entry
EcSMS35_4830 CDS
T00672
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
EcSMS35_4830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
ResIII
KIF21A
Anti-TRAP
DUF1319
HypA
Motif
Other DBs
NCBI-ProteinID:
ACB16614
UniProt:
B1LDN9
LinkDB
All DBs
Position
4930649..4936990
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AA seq
2113 aa
AA seq
DB search
MLPSVVSRQVADSVAAFLRAAFPLNSPLFNGENNDNVSMLEQFLAQPETLLKGPYLSAQL
PFRKSDLPLNFFPNLTLPFPPHAHQARAFQRLGSDAPQPTLVATGTGSGKTECFMFPLLN
HCAGASQAGVKAIIIYPMNALATDQASRFAKTIASDPQLHGKVTVGLFVGDSEIEPSKKM
SAEKVITCKHTLRESPPDILLTNYKMLDYLLMRPGDQPLWRYNQPGSLRYLVVDELHTFD
GAQGSDLACLVRRLKHHIGVDNQRFACVGTSATVGDELGQLLDYAKTIFDQPFTDDAVIR
EDRYTAAEYLQDYAIAYSQYPGPEVASALDPQSYATPVAYLNGQIPLWFPDSDLQLPDDL
ESDDGREKRIALGSLLRRHSVMHVLLHDLQGGILSERECLENLQVMLAESADHARRVLQS
ILALIAQARLEVPETEHDRQKRLQAKKVRPVLPFVQLRSQLWLREMRRLVASVAKTPRLV
FADDVAVEDREHYLPVIHCRDCHATGWASLRHGQSVQLETDLDGIYRQFFEKGRSIVLAF
PDNNEKAVSGAHQKLCPTCLKLNRQSSVQCGHCGHTELLQVLIPDMLKERKDELEFANEC
PYCNSKQGISILGSRAASLSAVMIHQLYGSQFNEHKKLITFSDSVQDAAHRASFFTARTW
PLMIRGQIASVLGEKETLPLDAFAARVCQQTRERSPDDAHFAANFIAPNMQWLNDYQTLK
NEGKLAENSDLPELVSLRLDWEVYSEFTLRARIGRTLEATGYAVAGVDKERFNPAITALH
QQLCEELGDEMSGVSVEQVAHLALGVIWYQRQAGAVMHPAFESYRRDGTTFMMTQKERTS
RYMPSIGPKTRKPAYASFEKINGFHRLIGAKSNPSWYQHWINRTLSNGNNLFISSVAETV
LRRLFTALKIAGVVKDFDTKGREAWGLVPSALVVSRDVVQLNCSCCREVVRAPADQGWQW
RNAPCLSLRCEGRYQEVDNTATWRWENMDIARVQGAEHTGLLSREDREATEKSFYRGNQP
WNINLLSATPTLEMGIDVGDLSTVLLCSVPPAQANYLQRIGRAGRKDGNALNITVAEGNP
HDQFFFEEPLEMMQGQVQAPGVFLNATAILERQLAAFCMDNWVKTGVPESAICKNVKQML
DELEFGRKSGFPYNLLRYIEQHHAEIAAQFTAIFPDLAAETRQQLLSYLQGAPGQRSLVQ
RIEEALKLLVEDRKSLRSRIDKLKRSIDKLENAPRDQNFDSDMRELTSERQALMALVNQI
NNKQTLNFLTDEGLLPNYAFPEAGITLRSVLWRRKEGGEAREYQNTTFEYERPASTALAE
LAPLNNFYAGGHKVEIEQIDLKVSEPENWRICSHCNYSENIDQTGDQHKYCPKCGTPGWA
DAGQKTTLLKLRQVYARASARDSQISDESDSREPAFFQRQLLVSFEKEDVSAAYAIEEGE
VPFGFEFLSKVTLRDINFGKMADDANELMIAGEAKKRTGFKVCLGCGMVQRPRDHEPRHD
LSCKYRTEPEKAKFEDYLYLYRQLESEALRILLPVSSYSNDRVVEASLGAAIQLGLKHYF
KGNVDHLKGVVYREPENEGESWRQYLVIYDTVPGGTGSLKELMRTPDNLLKLLELAYQAI
VECSCNHDTHKDGCYRCVYAYRDRGRMKYVSRDQARLLLAKILQARDSIRVIDSIKNISL
EAMMGSELEKRFISCLQENKNLIVSRSYAHQGAGWIINTRSEPMMSWHLKAQVDLGAKEA
VGIPCRPDYVLYPLMQSDAIKPVAIFLDGFAFHKNSVAEDVQKRQAIRDSDNFWVWTVTW
ADLKEPGLKHVQDVLGLGHNPDMKQPKFYNLFHDTNFAALEASFRERNSFALLLDYLADP
GGRTQLWQKMAAAHAWVWLDVKKSQDAGTKQKYAYEMQENAPAWRLAELLPDEPFVFGGL
LDSCNSSQQFIELASVLPQQAIKPTTSVAQMRSWLRLHICFDDRYTQDDGYEAGLNGFWR
LVNLLQFLPDMTFTSRKAVHLPQESVDVKVTATPEAVPETDESWAEIIEFGLLSAEEIAL
LQSHSLSAPTLGYELQNDEGEIIAEADLAWPSQKWALIIDNQEFIPLFTTRGWHVAFGPI
DENTLQHLSGGDK
NT seq
6342 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgtccgttgtcagtcggcaggtcgccgacagcgttgccgcctttttacgggcg
gcgttcccgctaaacagcccgctgtttaacggtgagaataacgataatgtctcaatgctg
gagcaatttctggcccagcccgaaacgctgctgaaaggaccatacctttccgcccagttg
ccgtttcgtaaaagtgacttaccgctgaattttttccctaatctgacgctgccgttcccg
ccgcacgcgcatcaggcccgggcatttcagcgtctgggaagcgacgcgccacagccgacg
ctggtcgcaaccggtaccggctccggtaaaacagaatgttttatgttcccgctgctcaac
cactgcgcgggcgcgtcacaagccggggttaaagcaattatcatctacccgatgaacgcc
ctggcaaccgatcaggccagccgtttcgccaaaaccatcgccagcgatccacaactgcat
ggcaaggtgaccgtcggcttgtttgtcggcgacagcgaaatcgaacccagcaagaaaatg
tcggcagaaaaggtcattacctgtaagcacacgctgcgcgaaagcccgccggacatcctg
ttgaccaactacaaaatgctcgactacctgctgatgcgccctggcgatcagccgctctgg
cgttacaaccagcccggctcattgcgttacctggtcgtggatgaattgcatacgtttgat
ggcgcgcaagggtcggatctggcctgtctggtgcgacgtctgaagcatcacataggtgtg
gataaccaacgattcgcctgcgtcgggacatcagctaccgtcggcgacgaactggggcaa
ctgctcgattacgcaaaaacaatctttgaccagccgtttaccgatgacgccgttattcgc
gaagatcgctacacggcagcggagtacttgcaggattatgccattgcgtacagtcagtat
ccggggccggaggtcgcttcggccctggacccgcagagttacgctaccccggtagcgtat
cttaacgggcaaatccctttgtggttccccgacagcgacttgcaactcccggacgatctg
gagagcgacgacgggcgtgaaaagcgtattgcgctggggtcactgttacgccgccacagc
gtgatgcatgtcttactccatgatctgcaaggcgggatcctctctgaacgagagtgtctg
gaaaatctccaggttatgctggcagaaagcgccgaccatgcccgacgcgtgctgcaaagc
attctggcactgatcgcgcaggcacgtctcgaagtaccggaaacggaacacgatcggcaa
aaacgtctccaggcgaagaaagtgcgtccggtgctgccatttgtgcaactgcgctcccag
ttgtggcttcgtgagatgcgtcgtctggtcgccagcgtggcgaaaacgccgcgactggtg
tttgccgatgatgtggcggtggaagaccgcgaacactatttgccggttatccactgccgt
gactgccacgcaaccggctgggccagcctgcgtcatgggcaaagcgttcagctggaaaca
gacctcgacggcatttatcgccagttctttgaaaaagggcgctccatcgtcctcgctttc
ccggataacaacgaaaaagcggtcagtggcgcacaccagaaactgtgccctacctgcctg
aaactgaaccgacagtccagcgtccagtgtggacattgtggtcatacagagctgttgcag
gtactgatcccggatatgctcaaagagcgtaaggacgagctggagtttgctaatgaatgc
ccgtactgcaacagcaaacaggggatttcgattttggggtcacgggctgccagtctgtcg
gcggtgatgattcaccagctttatggcagccagttcaacgaacataaaaagctgattacg
ttttctgactcggtacaagacgccgcgcatcgtgccagcttttttactgcccgaacctgg
ccgctgatgattcgtgggcaaatcgccagtgttcttggcgaaaaagagacattaccgctg
gatgcgttcgcggcgcgtgtttgccaacaaacgcgtgaacgttcaccggacgatgctcat
tttgcagcgaacttcatcgcaccaaatatgcagtggctgaatgattatcagacgctgaaa
aatgaaggcaaactggcggagaactccgatctgccggagctggtttccctgcgcctcgac
tgggaggtgtacagcgaatttaccctgcgcgcgcgtatcggacgtacgctggaagccacc
ggttatgccgttgccggagtggataaagaacgctttaatccggcaattaccgccctgcat
caacagctttgtgaagagctgggtgatgagatgtccggtgtgagcgtcgagcaggtcgcg
cacctggcgctgggggttatttggtatcaacgccaggccggggccgttatgcatccggcg
ttcgaaagttatcgccgtgatggcacgacctttatgatgacgcaaaaagagcgtacctcg
cgctatatgccttctatcggtccgaaaacgcgtaaaccggcttatgcgtcgtttgaaaaa
attaatggtttccatcgcctgattggcgcgaagtctaaccccagttggtatcagcattgg
atcaatcgcacgctgagtaacggcaataatctgtttatcagtagcgttgcggaaacggtg
ttacgacgcctgtttacggcgttgaaaatagccggagtagtaaaagattttgacaccaaa
gggcgtgaagcctggggactggtgccttcggcgctggtggtgagccgtgacgtcgttcag
cttaattgctcatgttgccgtgaggttgtccgggctccggccgatcaaggctggcagtgg
cgtaatgcgccttgtctctctttacgttgtgaaggtcgttaccaggaagtcgacaatacg
gcgacctggcgttgggagaacatggacatcgcgcgcgtgcagggcgcagaacacacgggg
ctgcttagccgtgaagatcgcgaagccaccgaaaaatcgttctaccgcggcaaccaaccg
tggaatatcaacctgttgtcggcaacaccgacgctggagatgggtatcgacgttggggat
ctttccaccgttttactctgttctgtcccacctgctcaggccaactacttgcagcgtatt
ggtcgcgccggtcgtaaagatggtaacgcgttaaacattaccgtggcagaagggaacccg
cacgatcagtttttctttgaagaaccactggagatgatgcagggccaggtgcaggctcct
ggcgtcttcctcaatgcaacggctattctcgaacgccagctggcagctttttgtatggat
aactgggtgaaaaccggtgtaccagaatccgctatctgtaaaaacgtcaaacagatgctg
gatgagctggagttcgggcgtaaatcgggttttccgtataacttactgagatatatcgaa
cagcatcatgcggagattgctgcacaatttacggcgatcttccccgatcttgccgcagaa
actcgccaacagttgttgtcttatcttcagggtgcgcctggacagcgttcgctggtgcag
cgtatcgaagaagcgttaaaactgctggtggaagatcgcaaatctctgcgttcacgcatc
gataaactcaagcgcagtatcgataagctggagaacgcgccgcgcgatcaaaactttgac
agcgatatgcgcgagttaacttcagaacggcaggcgctgatggcgctggtaaatcaaatc
aacaataagcagacgctgaatttcctcacggatgaaggtctgctgcctaactacgccttc
ccggaagccggtattacgttacgttctgtgctctggcggcgtaaagaaggcggggaagcg
cgtgaatatcaaaacaccactttcgaatatgaacgcccggcatcaacggcgctggctgag
ctggctccgctgaataatttctatgccggtgggcataaagttgaaattgagcagatagac
ctgaaggtctctgagccggagaactggcgtatctgtagccactgtaactacagcgaaaat
atcgaccagacgggcgaccagcataaatattgcccgaaatgtggcacaccggggtgggcc
gacgccggacaaaaaaccacgctgctgaaacttcgccaggtgtatgcccgcgccagcgca
cgtgatagccagatcagcgacgagagcgacagccgtgaacctgctttcttccagcgtcag
ctattggttagtttcgaaaaagaagatgtatcggcggcatacgcgattgaggaaggcgaa
gttccgtttggttttgaatttttaagcaaagtcaccctgcgggatatcaacttcggcaaa
atggcggatgatgccaatgagttgatgattgccggagaagcgaagaagcgaaccgggttt
aaagtttgcctcgggtgcggcatggtgcagcgtcctcgcgatcatgaaccacgtcatgat
ttgagctgcaaatatcgcacggaacccgaaaaggcgaagttcgaagattatctctatctc
tatcgccagctggagtcagaagcgttgcgtattctgctcccggtaagcagttacagtaat
gaccgtgtcgtggaggcttctcttggggcggcgatccagctaggtcttaaacattacttc
aaggggaatgtcgatcacctgaaaggcgttgtgtaccgcgagccggaaaatgaaggcgaa
tcctggcggcagtatctggtgatttacgataccgtcccggggggaactggttctcttaaa
gagctgatgcgcactcccgacaatttgctgaaattacttgaactggcctatcaggcgata
gtggaatgcagttgcaaccatgatacgcataaagatggttgttatcgttgcgtttacgct
taccgtgaccgtgggcgcatgaagtatgtctcccgcgatcaggcgcgtctcttgctggcg
aaaattttgcaggcaagagattcgatacgggtaattgattccatcaaaaacatttccctc
gaagccatgatgggcagtgagctggaaaaacggtttattagctgcctgcaagaaaataaa
aacctgattgtcagtcgcagttacgcgcatcagggcgctgggtggattattaacacccgc
agcgaaccgatgatgagctggcatcttaaagctcaggtggatttaggcgctaaagaggcg
gtggggatcccttgtcgcccggattacgtgctatatccgcttatgcagtctgatgccatt
aaaccggtagctattttccttgatggctttgcgtttcacaaaaatagcgtcgcagaggat
gtgcaaaaacgccaggcgattcgggatagcgataatttctgggtgtggacagtcacgtgg
gccgatctcaaagagcctgggcttaaacatgttcaggatgtcctggggcttgggcataac
ccggatatgaaacagcctaagttttataacctgtttcacgataccaactttgcggccctt
gaagcgtcgttccgggaacgcaacagttttgcactgctgctggattatctcgccgatccg
ggaggaagaacgcagttatggcagaaaatggctgctgcacatgcctgggtgtggttggat
gtgaagaagtcacaggacgcgggaacgaaacaaaagtatgcctatgaaatgcaggaaaac
gcgccagcctggcggctagcagagcttttgccagacgaaccgtttgtctttggtggttta
ctcgatagctgtaactcatcgcagcaatttattgagctggcttcggtgttgccacaacaa
gccattaaaccgacgaccagtgtcgcacaaatgcgcagctggctgcgtttgcatatctgt
tttgacgatcgctatacgcaggatgacggttatgaagcgggactcaatggcttctggcga
ctggtaaacctgttacagttcctgccggatatgacctttaccagccgtaaagccgtgcat
ttaccgcaggaaagcgttgacgttaaagttacggcaacgccagaggcagtaccagagact
gatgaaagttgggctgagattattgagtttggcttattaagcgctgaagagatcgcgttg
cttcagtctcattctctctctgcgccgactctcggctacgaattgcaaaatgatgaaggt
gaaattattgcggaagccgatctcgcctggccatcacaaaaatgggcattgattattgat
aatcaagaatttattccattattcacaaccaggggttggcacgttgcattcgggccaatt
gacgaaaatacattgcaacatctgtccggaggtgacaaatga
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