Escherichia coli SMS-3-5 (environmental): EcSMS35_4938
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Entry
EcSMS35_4938 CDS
T00672
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecm03400
]
EcSMS35_4938 (radA)
DNA repair and recombination proteins [BR:
ecm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EcSMS35_4938 (radA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
RecA
Rad51
GvpD_P-loop
AAA_22
SLFN-g3_helicase
AAA_14
ABC_tran
AAA_16
nSTAND3
AAA_24
AAA
DUF7125
NTPase_1
cobW
Zeta_toxin
Zn_ribbon_Thio2
AAA_29
DZR
Viral_helicase1
AAA_5
AAA_30
Herpes_Helicase
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
ACB16962
UniProt:
B1LEJ4
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All DBs
Position
5052799..5054181
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AA seq
460 aa
AA seq
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MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGV
AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA
QQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ
VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDALSVFDDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagctccaaaacgcgcctttgtttgtaatgaatgcggggccgattatccgcgc
tggcaggggcagtgcagtgcctgtcatgcctggaacaccatcaccgaggtgcgtcttgct
gcgtcgccaacggtggcgcgtaacgagcgtctcagtggctatgccggtagcgccggagtg
gcaaaagtccagaaactctccgacatcagccttgaggagctgccgcgtttttctaccgga
tttaaagagttcgaccgcgtattaggcggcggggtggtgccgggaagcgccattctgatt
ggcggtaacccaggtgcggggaaatccacgctgctgttgcaaacgctgtgcaaactggcc
cagcagatgaaaacgctgtatgtcaccggcgaagagtcgctgcaacaggtggcaatgcgc
gctcatcgccttggcctgccgactgacaatctcaatatgttgtcggaaaccagcatcgag
cagatctgcctgattgccgaagaagagcaaccgaagctgatggtaattgactccatccag
gtgatgcatatggcggatgtacaatcatcgcctggcagcgtggcgcaggtgcgtgaaacg
gcggcttatctgacgcgcttcgccaaaacgcgcggtgtggcgattgtcatggttgggcac
gtaaccaaagatggctcgctggctggccctaaagtgctggaacactgtatcgactgttcg
gtgcttctggatggcgatgccgactcccgttttcgcaccttacgcagccataaaaaccgc
ttcggcgcggtgaatgagctgggcgtcttcgcaatgaccgaacagggtctgcgtgaagtc
agcaacccttcggcaatctttttaagccgcggtgatgaagtgacctcgggtagctcagtg
atggtagtgtgggaaggaacgcgtccgctgctggtggagattcaggcgctcgtcgatcac
tcgatgatggcgaatccacgccgcgtggcagtcgggctggagcaaaaccgtctggcaatc
ctgctggcggtgcttcaccgtcacggtggtctacaaatggccgatcaggatgtgtttgtt
aacgtggtcggtggcgtgaaggtgacggaaaccagcgccgacttagcgttactgctggcg
atggtttccagcctgcgcgacagaccgctgccgcaggatctggtggtgtttggtgaagtc
gggctggcaggggagatccgcccggtgcccagcggtcaggaacgtatctcagaagcggcg
aaacatggttttcggcgggcgattgttccggcggctaacgtgccgaaaaaagcgccggaa
gggatgcagatttttggcgttaaaaaactctccgacgcgcttagcgtgttcgacgactta
taa
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