KEGG   Escherichia coli SMS-3-5 (environmental): EcSMS35_A0020
Entry
EcSMS35_A0020     CDS       T00672                                 
Symbol
traF
Name
(GenBank) type IV secretion-like conjugative transfer system pilus assembly protein TraF
  KO
K12057  conjugal transfer pilus assembly protein TraF
Organism
ecm  Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:ecm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ecm02044]
    EcSMS35_A0020 (traF)
Secretion system [BR:ecm02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   EcSMS35_A0020 (traF)
SSDB
Motif
Pfam: TraF
Other DBs
NCBI-ProteinID: ACB20281
UniProt: B1LRK1
LinkDB
Position
pSMS35_130:complement(20611..21354)
AA seq 247 aa
MNKALLPLLLCCFIFPASGKDAGWQWYNEKINPKEKENKPVPAAPRQEPDIMQKLAALQT
ATKRALYEAILYPGVDNFVKYFRLQNYWTQQAGLFTMSARKAMLAHPELDYNLQYSHYNG
TVRNQLAADQAQQRQAIAKLAEHYGIMFFYRGQDPIDGQLAQVINGFRDTYGLSVIPVSV
DGVINPLLPDSRTDQGQAQRLGVKYFPAMMLVDPKQGSVRPLSYGFISQDDLAKQFLNVS
EDFKPNF
NT seq 744 nt   +upstreamnt  +downstreamnt
atgaataaagcattactgccactgttactctgctgctttatttttccggcgtcaggaaaa
gatgcaggctggcagtggtataacgagaaaataaatccgaaggaaaaagaaaataaacct
gtacctgcagccccccgtcaggaaccggatattatgcagaaactggccgcactgcagacg
gcaacaaagcgggcgctgtacgaagccattctgtatcccggcgtggataattttgtgaaa
tatttccggctgcaaaattactggactcagcaggccgggcttttcaccatgagcgccaga
aaggccatgctggcacatcctgaactggactataacctgcagtacagccattacaacggc
acggtacggaaccagctggcagcagaccaggcgcagcagcgacaggccattgcgaaactg
gctgaacactacggcatcatgtttttttaccgggggcaggaccccatcgacgggcagctg
gcgcaggtcattaatggcttccgggatacctatggtctgagtgttattcccgtttccgtg
gatggcgtgattaatccgctgttgccggattcccggactgaccaggggcaggcgcagcgc
ctcggcgtgaaatatttcccggccatgatgctggttgacccgaaacagggcagtgttcgc
ccgttatcatacggctttatttcgcaggacgacctggcaaaacaattcctgaacgtttct
gaagattttaaacccaatttttaa

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