Ehrlichia canis: Ecaj_0137
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Entry
Ecaj_0137 CDS
T00270
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ecn
Ehrlichia canis
Pathway
ecn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ecaj_0137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecn03021
]
Ecaj_0137
03019 Messenger RNA biogenesis [BR:
ecn03019
]
Ecaj_0137
Transcription machinery [BR:
ecn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Ecaj_0137
Messenger RNA biogenesis [BR:
ecn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Ecaj_0137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
OB_RNB
AAA
AAA_25
S1CSD-TOTE-2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AAZ68188
LinkDB
All DBs
Position
205559..206989
Genome browser
AA seq
476 aa
AA seq
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MLNEKKKRTRYVSRKNANKNISIQSTANIVDKSEEVGDKEEVEGSAQVEAQEVKVLDLSE
LKKKSIEDLLKIAEELGVVSNGRMLKQEIIFHLMKKVVNDGGAAIGGGVVEILSDGFGFL
RSPEANYAASGDDVYISAGQIKKFNLRTGDIVSGEIRAPSEKERYFTLVKAHSINFTDMG
KLQRYVHFDDLIPLYPEERILLETNDPVSLSKKDISMRVIDIVAPLGKGQRALIVAPPRA
GKTIILQQIAHSISVNHPDIELIVLLIGERPEEVTDMCRSVKGEVVSSTFDEPGYRHVQL
AEIVIEKAKRMVEHKKNVVILLDSITRLARAYNSVIPSSGKVLTGGVDSNALQRPKRFFG
AARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNCEIILDRKISDKRVYPAIDISK
SGTRKEDMLIDHVCLKKVWLLRRLLSSMGSVEAMEFLRDKLSITKDNNEFFDMMNS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaatgaaaaaaagaaaagaacgagatacgttagtagaaaaaatgctaataagaat
atatcaattcaatcaacggcaaatattgtagataaatcagaagaagtaggagataaagaa
gaagtagaagggagtgcacaagtagaagcacaagaagtgaaagtgttggatttgagtgaa
ttgaaaaagaaaagtatagaagatctcttgaaaatagcagaagaacttggtgttgtaagt
aatggtagaatgcttaaacaggaaataatctttcacttgatgaaaaaagttgtaaatgat
ggaggtgcagcaataggaggtggagtagtagaaatattatctgatggatttggattctta
agatctccagaagcgaattatgctgcaagtggagatgatgtgtatatttctgcaggtcaa
ataaaaaagtttaatttaagaactggtgatatagtaagtggagaaataagagctcctagt
gaaaaagaaagatattttactttagtaaaagcacatagtataaattttacagatatggga
aaattgcaaagatatgtacactttgatgatttaatcccattgtacccggaagaaagaata
ctcttagaaactaatgatcctgttagcttgagtaaaaaagatataagtatgagggtaata
gatatagttgctcctttgggtaaaggacaaagagcccttatagttgctccaccaagagct
ggaaaaacgataatattgcaacaaatagcacattcaatatctgtcaatcaccctgatata
gagttaatagttttgttaataggtgaaagaccagaagaagttacagatatgtgtagatct
gtaaaaggagaagtagttagttcaacatttgatgaacctggatatagacatgtacaactt
gcagaaattgtgattgaaaaagcaaaaagaatggtagaacataagaaaaatgttgtaata
ctacttgattcaattacaagattagcaagggcatataattcagtgataccatcatcaggt
aaggtattgactggaggtgtggattctaatgctttacaaagaccaaaaagattctttggt
gcagcaagaaatatagaaaatggaggttcgttgacgataatagcaactgctctaatagaa
acagggtcaaaaatggatgaagtgatatttgaagaatttaaaggtacaggaaattgtgaa
ataatattggatagaaaaatatctgataaaagagtatatccagcaatagatatttcaaaa
tcaggtacaagaaaagaagatatgttaatagatcatgtgtgtttgaaaaaagtgtggttg
ttaagaaggttattatcatcaatgggttctgttgaagcaatggaatttttaagagataaa
ttgtctataactaaggataataatgagttctttgatatgatgaatagctaa
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