Ehrlichia canis: Ecaj_0338
Help
Entry
Ecaj_0338 CDS
T00270
Name
(GenBank) 3 exoribonuclease:RNA binding S1:KH
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ecn
Ehrlichia canis
Pathway
ecn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ecaj_0338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecn03019
]
Ecaj_0338
03016 Transfer RNA biogenesis [BR:
ecn03016
]
Ecaj_0338
Enzymes [BR:
ecn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Ecaj_0338
Messenger RNA biogenesis [BR:
ecn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Ecaj_0338
Transfer RNA biogenesis [BR:
ecn03016
]
Prokaryotic type
tRNA degradation factors
Ecaj_0338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH_2
S1_RRP5
KH-I_KHDC4-BBP
KH_N4BP1_2nd
S1_2
Motif
Other DBs
NCBI-ProteinID:
AAZ68381
UniProt:
Q3YSC4
LinkDB
All DBs
Position
505704..508094
Genome browser
AA seq
796 aa
AA seq
DB search
MFNLIRKSTEWGGKTLILESGKIARQANGAVMVSYAGTTVLATVVTGKTKEPVDFLPLTV
QFVAKSYAVGKIPGGFLKREGKPSDRETLISRLIDRSIRPLFPSGFYDEVSIVCNLLSYD
TVTPPEVTALIGATAALSISGVSFNGLVAGVRIGYLPSEDKYLLNASADDMLYSSLDLFL
SGNEDSVLMVESEASELSESQMLRAVTFGHQNCQEVINLIREFSEEKGVQPIEFIPHDIN
PIVNYIESSYKQDFSLAYSNTVKKERVLKLEELRDKVLSDFAEKCSVDNVECDNQDVISA
LKSFERSLVRSQIVETSSRIDGRAFDEIRNIEIEVDVLPKAHGSALFTRGNTQALVVTAL
GTPQDEQIVDDLDGDRRENFLLHYNFPPYAVGESAALRAPGRREIGHGKLAWRAIRYVLP
EKSDFPYTIRVVSEITESDGSSSMATVCGASLALMDTGVPIKSPVAGIAMGLIKEGDKFI
ILSDILGDEDYLGDMDFKVAGTAEGVTALQMDMKISGISVDVIEKALLQAKDGRMHILSK
MNAVIQESRNSIKNHAPRIESIFINKDKIRNVIGSGGKNIRDICEKTGAKIEIIQDGTVM
IYAVNNEAVEYAKSMIMDIVTEPEIGKVFEGTVVEIVKFGAFVNFLGGKRGLIHISEIKN
EHISAVGSVISVNDKVKVLVIGIDREHVQLSMRRVDQETGEPIDGELYNVRKSSFSDDSS
SSGTSSSGSSFKESYSGNRHGSHEKRRSGGSRSSRRNSSGSNYYREDLHSSDFGNNNRSF
SNSRNGHEVPRKPRFF
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatttgataagaaaatctacagagtgggggggtaagaccttaattttagagagc
ggtaagatagcaagacaagctaatggtgctgtgatggtaagttatgctggtactacagtt
ttagcaactgtggtaacaggtaaaacaaaagagccagtagattttctgcctttaactgta
cagtttgttgcaaaaagttatgctgtaggtaaaattcctggaggttttttaaagagagaa
ggtaaaccatctgatagagagacgttaatctctcgtttaattgatagaagtataagacct
ctattcccttctggattttatgatgaggttagtatagtatgtaatttactttcatatgat
acagttactcctcctgaagttactgcactaattggtgcaactgcagctttatctatatct
ggtgtttcttttaatgggttagtagctggtgtaagaattggttatttaccgtctgaagat
aaatacttattgaatgcatctgctgatgatatgttatatagttctttggatttgtttttg
tcagggaatgaagattctgttttaatggttgaatctgaagcttctgaattatctgaatct
cagatgttaagagcagtcacatttggacatcaaaattgccaggaagttattaatttaatt
agagagtttagtgaagaaaaaggtgtacagcctattgaatttattcctcatgatattaac
ccaattgtgaattatatagaatcttcttacaaacaagattttagtttagcatattcaaat
actgtaaagaaagaaagagtactgaagttagaagaattgagagataaagtgctttctgat
tttgcagaaaaatgtagtgttgataatgtggaatgtgataatcaagatgtaattagtgca
ttaaagtcctttgaaagatcgttagtaaggtctcaaattgtagaaacttcttctaggata
gatggacgtgcgtttgatgaaatacgtaatatagaaattgaggtagatgtattacctaaa
gctcatggatctgctttatttactagaggtaatacccaggcattagttgttactgcatta
ggtacacctcaagatgaacaaatagttgatgatttagatggtgatagaagagagaatttt
ttgttgcattataattttcctccctatgcagtaggtgaatctgcggctttacgtgctcct
ggtagaagagagataggtcatggtaagcttgcttggagagcaattcgttatgtattgcct
gaaaaatcagattttccatatactattagagtagtttctgaaattactgaatcagatggt
tcttcttcaatggctactgtttgtggagcatctttggctttaatggatactggtgtacca
ataaaatctcctgttgctggtattgcaatgggacttattaaggaaggtgataagtttata
atactgtcagatatattaggggatgaggattaccttggtgatatggattttaaagtagct
ggtactgctgaaggtgttactgctttgcaaatggatatgaagatatcaggtattagtgtt
gatgtgattgaaaaagcattacttcaggcaaaagatggtaggatgcatattttaagcaag
atgaatgcggtgatacaagaatctcgtaatagtataaaaaaccatgctcctagaatagag
tctatttttataaataaagataagattcgtaatgtaataggtagtggaggaaaaaatata
cgtgatatctgtgaaaaaacaggtgcaaagattgaaataatacaagatggcactgttatg
atatatgctgttaataatgaagcagtagagtatgctaagagcatgatcatggatattgta
actgagccagaaataggtaaagtttttgaaggcacagttgttgaaattgtgaaatttggt
gcttttgttaacttcttaggtggtaagagaggcttgatacatattagcgaaataaagaat
gaacatattagtgcagtaggtagtgtaatttctgtaaatgataaagtgaaggtactagtt
attggtatagatcgtgagcatgttcaattatctatgcgtagggtagatcaagaaactgga
gaacctatagatggtgagctttataatgtaagaaaaagtagcttttctgatgattcatcc
tcctctggtacttctagtagtggcagtagctttaaagaaagctacagtggcaataggcat
ggtagtcatgaaaagaggcgtagtggaggtagtagatcatcacgtcgcaatagtagtgga
tctaattattatcgtgaagatttacattcgagtgactttggaaataataatcgttcattt
agtaatagtagaaatggtcatgaagttcctaggaaacctaggtttttttaa
DBGET
integrated database retrieval system
