Escherichia coli K-12 MG1655: b0092
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Entry
b0092 CDS
T00007
Symbol
ddlB
Name
(RefSeq) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
eco
Escherichia coli K-12 MG1655
Pathway
eco00470
D-Amino acid metabolism
eco00550
Peptidoglycan biosynthesis
eco01100
Metabolic pathways
eco01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
b0092 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
b0092 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
b0092 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eco01011
]
b0092 (ddlB)
Enzymes [BR:
eco01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
b0092 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
eco01011
]
Precursor biosynthesis
Amino acid ligase
b0092 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATPgrasp_YheCD
TTL
ATPgrasp_ST
GARS_A
ATP-grasp_3
RimK
Motif
Other DBs
NCBI-GeneID:
946324
NCBI-ProteinID:
NP_414634
Pasteur:
ddlB
RegulonDB:
ECK120000208
ECOCYC:
EG10214
ASAP:
ABE-0000326
UniProt:
P07862
Structure
PDB
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All DBs
Position
102233..103153
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AA seq
306 aa
AA seq
DB search
MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFI
ALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWVALTRA
EFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQHDEEVLIE
KWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLSDETQYFCPAGLEASQEANLQAL
VLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVR
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaaatcgcggtcctgttgggtgggacctccgctgagcgggaagtttctctg
aattctggcgcagcggtgttagccggactgcgtgaaggcggtattgacgcgtatcctgtc
gacccgaaagaagtcgacgtgacgcaactgaagtcgatgggctttcagaaagtgtttatc
gcgctacacggtcgcggcggtgaagatggtacgctgcaggggatgctcgagctgatgggc
ttgccttataccggaagcggagtgatggcatctgcgctttcaatggataaactacgcagc
aaacttctatggcaaggtgccggtttaccggtcgcgccgtgggtagcgttaacccgcgca
gagtttgaaaaaggcctgagcgataagcagttagcagaaatttctgctctgggtttgccg
gttatcgttaagccgagccgcgaaggttccagtgtgggaatgtcaaaagtagtagcagaa
aatgctctacaagatgcattaagattggcatttcagcacgatgaagaagtattgattgaa
aaatggctaagtgggccggagttcacggttgcgatactcggtgaagaaattttaccgtca
atacgtattcaaccgtccggaaccttctatgattatgaggcgaagtatctctctgatgag
acacagtatttctgccccgcaggtctggaagcgtcacaagaggccaatttgcaggcatta
gtgctgaaagcatggacgacgttaggttgcaaaggatggggacgtattgacgttatgctg
gacagcgatggacagttttatctgctggaagccaatacctcaccgggtatgaccagccac
agcctggtgccgatggcggcacgtcaggcaggtatgagcttctcgcagttggtagtacga
attctggaactggcggactaa
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