Escherichia coli K-12 MG1655: b0143
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Entry
b0143 CDS
T00007
Symbol
pcnB
Name
(RefSeq) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
eco
Escherichia coli K-12 MG1655
Pathway
eco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
b0143 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eco03019
]
b0143 (pcnB)
Enzymes [BR:
eco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
b0143 (pcnB)
Messenger RNA biogenesis [BR:
eco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
b0143 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-GeneID:
947318
NCBI-ProteinID:
NP_414685
RegulonDB:
RDBECOLIGNC00682
ECOCYC:
EG10690
ASAP:
ABE-0000493
UniProt:
P0ABF1
LinkDB
All DBs
Position
complement(157729..159126)
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AA seq
465 aa
AA seq
DB search
MFTRVANFCRKVLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMYRLNKAGY
EAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEV
ATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDY
VGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLLND
IPPARLFEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPMERIIEQVLK
NTDTRIHNDMRVNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSL
AIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLV
KWWGEFQVSAPPDQKGMLNELDEEPSPRRRTRRPRKRAPRREGTA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atttttacccgagtcgctaatttttgccgcaaggtgctaagccgcgaggaaagcgaggct
gaacaggcagtcgcccgtccacaggtgacggtgatcccgcgtgagcagcatgctatttcc
cgcaaagatatcagtgaaaatgccctgaaggtaatgtacaggctcaataaagcgggatac
gaagcctggctggttggcggcggcgtgcgcgacctgttacttggcaaaaagccgaaagat
tttgacgtaaccactaacgccacgcctgagcaggtgcgcaaactgttccgtaactgccgc
ctggtgggtcgccgtttccgtctggctcatgtaatgtttggcccggagattatcgaagtt
gcgaccttccgtggacaccacgaaggtaacgtcagcgaccgcacgacctcccaacgcggg
caaaacggcatgttgctgcgcgacaacattttcggctccatcgaagaagacgcccagcgc
cgcgatttcactatcaacagcctgtattacagcgtagcggattttaccgtccgtgattac
gttggcggcatgaaggatctgaaggacggcgttatccgtctgattggtaacccggaaacg
cgctaccgtgaagatccggtacgtatgctgcgcgcggtacgttttgccgccaaattgggt
atgcgcatcagcccggaaaccgcagaaccgatccctcgcctcgctaccctgctgaacgat
atcccaccggcacgcctgtttgaagaatcgcttaaactgctacaagcgggctacggttac
gaaacctataagctgttgtgtgaatatcatctgttccagccgctgttcccgaccattacc
cgctacttcacggaaaatggcgacagcccgatggagcggatcattgaacaggtgctgaag
aataccgatacgcgtatccataacgatatgcgcgtgaacccggcgttcctgtttgccgcc
atgttctggtacccactgctggagacggcacagaagatcgcccaggaaagcggcctgacc
tatcacgacgctttcgcgctggcgatgaacgacgtgctggacgaagcctgccgttcactg
gcaatcccgaaacgtctgacgacattaacccgcgatatctggcagttgcagttgcgtatg
tcccgtcgtcagggtaaacgcgcatggaaactgctggagcatcctaagttccgtgcggct
tatgacctgttggccttgcgagctgaagttgagcgtaacgctgaactgcagcgtctggtg
aaatggtggggtgagttccaggtttccgcgccaccagaccaaaaagggatgctcaacgag
ctggatgaagaaccgtcaccgcgtcgtcgtactcgtcgtccacgcaaacgcgcaccacgt
cgtgagggtaccgcatga
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