Escherichia coli K-12 MG1655: b1040
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Entry
b1040 CDS
T00007
Symbol
csgD
Name
(RefSeq) DNA-binding transcriptional dual regulator CsgD
KO
K04333
LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
Organism
eco
Escherichia coli K-12 MG1655
Pathway
eco02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
b1040 (csgD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eco03000
]
b1040 (csgD)
Transcription factors [BR:
eco03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
b1040 (csgD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
VpsT-like_REC
Sigma70_r4_2
HTH_24
HTH_40
HTH_23
Mcm-like_N
Motif
Other DBs
NCBI-GeneID:
949119
NCBI-ProteinID:
NP_415558
Pasteur:
csgD
RegulonDB:
RDBECOLIGNC03411
ECOCYC:
G6546
ASAP:
ABE-0003530
UniProt:
P52106
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All DBs
Position
complement(1102546..1103196)
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AA seq
216 aa
AA seq
DB search
MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDM
MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNG
LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL
FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaagtccatagtattcatggtcatacattattgttgatcactaaatcttct
ttgcaggcgacagctctcttgcagcaccttaaacaatcgctggcaattacaggaaaatta
cataatattcaacgttctctggacgatatctcttcaggctctattattcttctggatatg
atggaagcggataaaaagcttatccattattggcaggatactttgagcaggaaaaacaac
aatatcaaaatattgttgctaaatacgcctgaagattacccgtaccgcgacattgaaaac
tggcctcatatcaacggcgttttttattccatggaggatcaagaacgtgttgtcaatggg
ttgcaaggcgtcctgcgcggcgaatgctactttacgcaaaagcttgccagctacctgatt
acgcattcaggtaactatcgttataacagcacggaatcagccctccttactcatcgggaa
aaagagatcctgaataagctgcgtatcggcgcgtctaataacgagatcgctcgttcgttg
ttcatcagcgaaaatacggttaaaacgcatctttataatcttttcaagaagatagccgta
aaaaaccggacacaagcggtttcctgggcaaacgataacctcaggcgataa
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