Escherichia coli K-12 MG1655: b1123
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Entry
b1123 CDS
T00007
Symbol
potD
Name
(RefSeq) spermidine preferential ABC transporter periplasmic binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
eco
Escherichia coli K-12 MG1655
Pathway
eco02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
b1123 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eco02000
]
b1123 (potD)
Transporters [BR:
eco02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
b1123 (potD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Lipoprotein_8
PG_binding_2
Motif
Other DBs
NCBI-GeneID:
945682
NCBI-ProteinID:
NP_415641
Pasteur:
potD
RegulonDB:
RDBECOLIGNC00742
ECOCYC:
EG10752
ASAP:
ABE-0003789
UniProt:
P0AFK9
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(1181783..1182829)
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AA seq
348 aa
AA seq
DB search
MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYE
SNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFD
PNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKL
GYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGSAFVARQAG
TPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIGYPTPNLAA
RKLLSPEVANDKTLYPDAETIKNGEWQNDVGAASSIYEEYYQKLKAGR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatggtcacgccacctgctcgcggcgggtgctctggcactgggcatgagcgcc
gctcacgccgatgacaacaacacgctgtatttctacaactggaccgagtacgtgccgcca
ggactgcttgaacagttcaccaaagaaaccggtattaaggttatctattcgacttacgag
tcgaacgaaaccatgtacgccaagctgaaaacatacaaagacggtgcctatgatctggtg
gttccttcaacctattacgttgataaaatgcgtaaagaagggatgatccagaagatcgac
aagtcgaagttaacaaacttcagcaatctcgatccagacatgctcaacaagccttttgac
ccgaataacgactactccattccgtatatctggggtgcgacggcgattggtgttaacggt
gatgcggtggatccgaaatctgtcaccagctgggccgatctgtggaagccagagtacaaa
ggcagcctgctgttgaccgacgatgcccgtgaagtgttccagatggcgctgcgtaagctg
ggctactccggtaacaccaccgatccgaaagagattgaagctgcatataacgagctgaaa
aaactgatgccaaacgtggcagcctttaactccgataacccggcgaacccgtacatggaa
ggcgaagttaacctcggcatgatctggaacggttctgctttcgttgcacgccaggcgggt
acgccaattgacgtggtgtggccgaaagaaggcggcattttctggatggacagcctggcg
atcccggcaaatgccaaaaacaaagaaggcgcgctgaaattgatcaacttcctgctgcgc
ccggatgtggcaaaacaggttgctgaaactatcggttatccaacgccaaaccttgcggcg
cgtaagctgttaagtccagaagtggcgaacgataaaacactctacccggatgctgaaacc
attaaaaatggcgaatggcagaatgacgttggcgcagccagcagcatttatgaagagtat
tatcagaagctgaaagcaggacgttaa
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