Escherichia coli K-12 MG1655: b1451
Help
Entry
b1451 CDS
T00007
Symbol
yncD
Name
(RefSeq) putative TonB-dependent outer membrane receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
eco
Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eco02000
]
b1451 (yncD)
Transporters [BR:
eco02000
]
Other transporters
Pores ion channels [TC:
1
]
b1451 (yncD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-GeneID:
946015
NCBI-ProteinID:
NP_415968
Pasteur:
yncD
RegulonDB:
RDBECOLIGNC03617
ECOCYC:
G6762
ASAP:
ABE-0004839
UniProt:
P76115
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(1520963..1523065)
Genome browser
AA seq
700 aa
AA seq
DB search
MKIFSVRQTVLPALLVLSPVVFAADEQTMIVSAAPQVVSELDTPAAVSVVDGEEMRLATP
RINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIRGIRLYVDGIPATMPDGQG
QTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYG
LKATGATGDGTQPGDVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDEASKLSLIFN
SVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTIKQTQAGLRYERSLSSRDDMSVMMY
AGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQGIDSRWTHRGELGVPVTFTTGLNYEN
MSENRKGYNNFRLNSGMPEYGQKGELRRDERNLMWNIDPYLQTQWQLSEKLSLDAGVRYS
SVWFDSNDHYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELS
YRADGQSGMNLGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGGRTTYK
NAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVCNEQDCNGNRMPGIARNMGFA
SIGYVPEDGWYAGTEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVD
NLFDKEYVGSVIVNESNGRYYEPSPGRNYGVGMNIAWRFE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttttccgtccgacagaccgttttgcccgcactgcttgtcctttcccccgtt
gtttttgccgctgatgaacagactatgattgtcagtgccgcaccgcaggtggtttcagaa
ctggataccccagcagcagtaagcgtggtggatggcgaggagatgcgcctggcaacaccg
cgcattaacttgtccgaatcactgaccggcgtgcctggtttgcaggtacaaaaccggcag
aactatgcgcaagatttacagctgtcgattcgcggatttggctcccgctccacttacggt
attcgcggtattcgcctgtatgtggacggtattcccgccaccatgcccgacgggcaaggg
caaacatccaacatcgatttaagcagtgtgcaaaatgtggaagtgctgcgtggccccttc
tctgccctgtatggcaacgcgtctggtggggtaatgaatgtcaccacccagaccggacaa
cagccaccaaccattgaagccagtagttactacggcagttttggcagctggcgctatggg
ctgaaagcaacgggcgcaacgggagacggcacacagcctggcgatgtcgattacaccgtc
tcaaccacgcgttttacgacccacggctatcgtgaccatagtggcgcacagaaaaattta
gccaatgccaaactgggcgtacgcattgatgaagccagcaaattaagtctgattttcaat
agtgtggatatcaaagcagatgacccaggtgggctaaccaaagcagaatggaaggctaat
ccacaacaagcgcctcgtgcagaacagtacgacacgcgaaaaaccatcaagcaaactcag
gctgggttgcgctatgagcgtagcctgagttcgcgggatgatatgagtgtgatgatgtat
gccggagagcgagaaacgacccagtaccagtcaatacccatggcaccacaacttaacccg
tcacatgcgggcggcgtgattaccctgcaacgccattaccagggaatagacagccgctgg
acacaccgtggtgaactgggcgttccggtcacgttcactaccggcctgaactacgaaaac
atgagtgaaaaccgcaagggctacaataacttccgcctgaatagcggcatgccggagtac
gggcaaaaaggtgagttgcgtcgcgacgaacgcaatctgatgtggaacatcgatccctat
ttacagacgcagtggcagctgagcgaaaaactgtcgctggatgctggcgtgcgctacagc
tccgtgtggtttgattccaacgaccattacgttactccgggtaacggcgatgacagcggt
gatgccagttatcataaatggctacctgccggttcgttaaaatatgcaatgaccgatgcc
tggaatatctatctggcagccgggcgaggttttgaaacgccgacgattaatgagctgtct
tatcgtgctgatgggcaaagcggtatgaacttaggtttaaaaccatccaccaacgataca
attgagatcggcagtaaaacgcgtattggtgatgggctgcttagtctcgcattgtttcag
accgacactgatgatgaaattgttgtcgatagcagtagcggtgggcgtacgacttacaaa
aatgccggaaagacccgtcgtcaaggcgctgaactggcatgggatcaacgtttcgcagga
gattttcgcgtaaacgcgtcctggacctggcttgatgcgacctatcgcagcaatgtttgc
aatgaacaggattgtaacggtaatcggatgccagggatcgcccgtaatatgggctttgcg
tcgataggttatgtaccggaagatggttggtatgcaggcacggaagcgcgttatatgggc
gatattatggcagatgatgaaaatacggcaaaagcgccgtcttatactctcgtcggctta
ttcaccgggtataaatacaattaccacaatttaactgtggatttatttggtcgtgtcgat
aatttattcgataaagaatacgttggttctgtcattgtcaatgagtcaaacgggcgatat
tacgaaccttcgcccggacgaaattatggtgtcggcatgaatattgcgtggagatttgag
taa
DBGET
integrated database retrieval system
