KEGG   Escherichia coli K-12 MG1655: b1489
Entry
b1489             CDS       T00007                                 
Symbol
dosP
Name
(RefSeq) oxygen-sensing c-di-GMP phosphodiesterase DosP
  KO
K13243  c-di-GMP-specific phosphodiesterase [EC:3.1.4.52]
Organism
eco  Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:eco00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    b1489 (dosP)
Enzymes [BR:eco01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.52  cyclic-guanylate-specific phosphodiesterase
     b1489 (dosP)
SSDB
Motif
Pfam: EAL PAS_9 GGDEF PAS PAS_4 PAS_8 PAS_3 PAS_7 PAS_10 PBV_CP GGDEF_GdpP
Other DBs
NCBI-GeneID: 945815
NCBI-ProteinID: NP_416006
Pasteur: yddU
RegulonDB: RDBECOLIGNC03637
ECOCYC: G6783
ASAP: ABE-0004963
UniProt: P76129
Structure
LinkDB
Position
complement(1563334..1565733)
AA seq 799 aa
MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML
IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA
LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ
PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN
LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM
PIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAA
LALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDS
LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSK
PIMIDDKPFPLTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE
RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEE
IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID
GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID
KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR
PLPAEEIPGWMSSVLPLKI
NT seq 2400 nt   +upstreamnt  +downstreamnt
atgaagctaaccgatgcggataatgccgccgatggcatttttttccccgcccttgagcaa
aatatgatgggtgcggtgttaattaacgaaaatgatgaagtgatgtttttcaaccccgcc
gcagagaagctctggggatacaaacgtgaagaagtcattggcaataacattgatatgctg
attccgcgggatttgcgtcctgcgcatcctgaatacattcgtcacaaccgtgaaggcggt
aaagcgcgtgttgaggggatgagtcgggagctgcagctggagaaaaaagacggcagtaaa
atctggacccgttttgcgctatcgaaagtgagcgccgaggggaaagtttattacctggcg
ctggtacgggatgccagcgtagaaatggcgcaaaaagaacagacccgacaattgattatt
gccgttgaccatctcgaccgaccggtgattgtcctcgatccggaacgccatattgtgcag
tgcaatcgcgcatttaccgaaatgtttggttactgcattagcgaagccagcggtatgcag
cccgatacactcctgaacattcctgaattccctgccgataaccgcattcgtttacaacag
ttgctatggaaaaccgcccgcgatcaggacgaatttctgctgttgacgcgcaccggtgaa
aaaatctggattaaagcctctatcagcccggtttatgacgtgctcgcgcatctgcagaac
ctggtaatgactttctcggatatcaccgaagaacggcagattcgccagcttgaaggcaat
attctcgccgccatgtgcagcagcccgccatttcatgaaatgggggaaatcatttgtcgt
aacatcgaatctgtactcaacgaatcgcatgtttcgctgttcgcactgcgcaacgggatg
ccgatacactgggcgtcatcttcccacggtgcagaaattcaaaatgcgcaaagctggtca
gcgaccattcgtcagcgtgatggcgcgcctgcggggatcctgcaaattaaaacctcgtca
ggagcagaaaccagcgcctttatcgaacgcgtggcagatatcagccagcatatggccgcg
ctggcgctggaacaggaaaaaagccgtcagcatattgaacaactcatccaatttgatccg
atgaccggtctgccaaatcgcaataacctgcacaattacctcgatgacctggtcgacaaa
gccgtctctcccgtggtgtatctcatcggtgttgaccatattcaggatgtgattgatagc
cttggctatgcgtgggccgatcaggcattgctggaagtggtcaatcgctttcgtgaaaaa
ctcaaaccggatcagtatctctgtcgtatcgaaggtacgcagtttgtcctcgtgagcctc
gaaaacgacgtcagtaacattacccaaatcgccgatgagctacggaatgtggtcagcaag
ccgataatgattgacgataaacccttcccgcttaccttgagtattggcatcagctacgac
ctgggtaaaaaccgcgattacttgctctccactgctcacaatgcaatggattatattcgc
aagaatggcggtaacggctggcagttcttcagcccggcgatgaacgaaatggtaaaagag
cgtttggttttaggcgcagcgctgaaagaagcgattagcaataaccaactgaaactggtt
taccagccgcaaatcttcgcagaaacgggtgaactgtacggcatcgaagcccttgctcgc
tggcacgatcccctgcatggtcatgtgcccccttcacggtttattcctctcgcagaagag
attggtgaaatcgaaaatattgggcgctgggtcatcgcggaagcttgccgtcagttagca
gaatggcgtagccagaatattcatatcccggcgttatccgtgaacttgtcggcgctgcac
tttcgcagtaatcaactgcctaatcaggtgtctgatgcaatgcacgcctggggtattgac
ggccaccagctgacggtagaaatcacggaaagcatgatgatggaacacgataccgaaatc
tttaagcgcattcagatcctgcgtgatatgggcgtgggcttatcggtagatgattttggt
acgggcttttccggattatcccgcttagtcagtcttccggtaacggaaatcaaaattgac
aaaagttttgtcgatcgttgtctgaccgaaaaacgcatccttgccttacttgaagccatt
accagcattgggcaaagcctcaatttaaccgtcgtggcggaaggcgtcgaaaccaaagag
caatttgagatgctacgcaagatccactgtcgcgttattcagggatatttcttttcccgc
cccctacccgccgaagaaattccaggctggatgagcagcgtgttaccgctgaaaatctga

KEGG   Escherichia coli K-12 MG1655: b0315
Entry
b0315             CDS       T00007                                 
Symbol
pdeL
Name
(RefSeq) DNA-binding transcriptional regulator/c-di-GMP phosphodiesterase PdeL
  KO
K13244  c-di-GMP-specific phosphodiesterase [EC:3.1.4.52]
Organism
eco  Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:eco00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    b0315 (pdeL)
Enzymes [BR:eco01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.52  cyclic-guanylate-specific phosphodiesterase
     b0315 (pdeL)
SSDB
Motif
Pfam: EAL GerE HTH_38 HTH_40 HTH_23 Hom_end
Other DBs
NCBI-GeneID: 947459
NCBI-ProteinID: NP_414849
Pasteur: yahA
RegulonDB: RDBECOLIGNC01213
ECOCYC: EG11236
ASAP: ABE-0001086
UniProt: P21514
Structure
LinkDB
Position
332371..333459
AA seq 362 aa
MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQK
KQLFEKLGIQSDITFWRDIFFQYNPEIISATGSNSHRYINDNHYHHIVTPEAISLALENH
EFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQT
ADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIP
VTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGH
IVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMKA
GG
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgaattcatgtgattttcgtgtttttctgcaagagttcggtacaacggttcatttgtca
ttgcctggtagcgtatccgagaaagaacgactgctactcaagctgctgatgcagggaatg
tctgtaacagaaatatcacagtacagaaatcgcagtgcaaagacaatttcacatcaaaag
aaacagctctttgagaaactggggattcagagcgatattactttctggcgcgatattttc
tttcagtacaatccggagatcatatccgccacggggagtaatagtcacagatatattaat
gataatcactatcaccatatcgtcacgcctgaagccatcagtctggcgttggaaaaccac
gaattcaaaccgtggatccaaccggttttctgcgcgcagactggcgtactgacgggctgt
gaggtgcttgtccgctgggaacatccacaaacgggaattatcccaccggatcagtttatt
cctctggcggagtcatccggtcttattgtcataatgacccgccaactgatgaaacagact
gcggatattctgatgccggtaaaacatttgctgccggacaatttccatattggcatcaac
gtctcggcgggttgttttttggcagcgggatttgaaaaagagtgtctgaacctggttaat
aaattaggtaacgataaaatcaagctggttctcgagctaacggaacgtaaccctattccg
gtaacgccagaagccagagcgatatttgacagccttcatcagcacaacattacctttgcg
ctggatgactttggtacgggttatgcgacctatcgttacttgcaggcgttcccggtcgat
tttattaagatcgataagtcatttgtgcaaatggcgagtgtcgacgaaatctccggtcat
attgtggacaatattgtcgaactagcgcgtaagcctggtctgagtatcgtggcggaaggg
gtagaaacccaggagcaggcggatttaatgatcggtaaaggcgttcactttttgcagggc
tatttgtactctccgccagtaccgggtaataaatttatctctgaatgggtaatgaaagca
ggtggttga

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