Escherichia coli K-12 MG1655: b1512
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Entry
b1512 CDS
T00007
Symbol
lsrR
Name
(RefSeq) DNA-binding transcriptional repressor LsrR
KO
K11531
lsr operon transcriptional repressor
Organism
eco
Escherichia coli K-12 MG1655
Pathway
eco02024
Quorum sensing
eco02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
b1512 (lsrR)
02026 Biofilm formation - Escherichia coli
b1512 (lsrR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eco03000
]
b1512 (lsrR)
Transcription factors [BR:
eco03000
]
Prokaryotic type
Other transcription factors
Others
b1512 (lsrR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar-bind
MarR_2
HTH_Crp_2
Sigma70_r4
HTH_24
HTH_23
DUF7343
HTH_37
HTH_CodY
HTH_IclR
MarR
Crp
Motif
Other DBs
NCBI-GeneID:
946070
NCBI-ProteinID:
NP_416029
Pasteur:
ydeW
RegulonDB:
RDBECOLIGNC03652
ECOCYC:
G6799
ASAP:
ABE-0005045
UniProt:
P76141
Structure
PDB
PDBj
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All DBs
Position
complement(1600288..1601241)
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AA seq
317 aa
AA seq
DB search
MTINDSAISEQGMCEEEQVARIAWFYYHDGLTQSEISDRLGLTRLKVSRLLEKGHQSGII
RVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLADADVGGRLGIGAAHMLMSLLQPQQML
AIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIGQLNAACSVNIIPAPLRASS
ADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGA
VGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGY
INALVTDQDTAAAILRS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcaacgattcggcaatttcagaacagggaatgtgtgaagaagaacaggtcgcg
cggatcgcgtggttttactatcacgacgggctgacccagagcgagatcagcgatcgtctc
ggcctgacacgtttgaaagtgtcgcgattgctggagaaagggcatcagtccggcattatt
cgcgtacagattaattctcgctttgaaggctgtctggaatatgaaactcaattacgtcgt
cagttttcgctgcaacatgtccgggtgatccctgggcttgcggatgctgatgtcggtggg
cgactggggataggcgcggcgcatatgttgatgagtttacttcaaccacaacagatgctg
gcgattggttttggcgaggcaaccatgaatacgctgcaacgcttaagtggttttatttcg
tcacagcaaattcgcctggtcacgctctccggtggcgtcggttcttatatgacgggaatc
gggcagcttaacgcggcgtgcagtgtgaatattattccggctccgttgcgggcatcctcc
gctgacattgcccgtacgctaaaaaatgaaaattgcgtcaaagatgttctgttagccgcg
caagcagcggatgtggcgattgtcggcattggtgctgtgagtcaacaggacgatgcgaca
atcattcgctccggttatatcagccagggcgaacagttaatgattggccgaaaaggggcg
gttggcgacattttaggctacttttttgatgcaaaaggtgacgttgtcacgaatatcaaa
atacataacgaactgattggcttacctttaagcgcgctgaagaccatacccgtccgggtt
ggcgtggcagggggagaaaataaagccgaagcaattgccgctgcaatgaaaggcggttat
atcaacgcactggttaccgatcaggacacagcagcggcgattttacgtagttaa
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integrated database retrieval system
