Escherichia coli K-12 MG1655: b2503
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Entry
b2503 CDS
T00007
Symbol
pdeF
Name
(RefSeq) cyclic di-GMP phosphodiesterase PdeF
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
eco
Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
b2503 (pdeF)
Enzymes [BR:
eco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
b2503 (pdeF)
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Gene cluster
GFIT
Motif
Pfam:
EAL
MASE1
Motif
Other DBs
NCBI-GeneID:
946968
NCBI-ProteinID:
NP_416998
Pasteur:
yfgF
RegulonDB:
RDBECOLIGNC04141
ECOCYC:
G7314
ASAP:
ABE-0008240
UniProt:
P77172
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Position
complement(2626695..2628938)
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AA seq
747 aa
AA seq
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MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFF
SWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRL
ISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGV
PLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTI
FSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSS
SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLR
IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA
LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR
RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELIS
PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS
QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN
VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGID
YMQGYLIGKPQPLIDTLNEIEPIRESA
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaatgcaacttatataaaaatacgtgataaatggtgggggcttccgctgttc
ctgccttctttaatcttgcccattttcgcccacattaatactttcgcgcatatttcttcc
ggtgaggtttttctcttttatctgcctctggcactgatgatcagcatgatgatgtttttc
agctgggcggcattgccagggatcgccttagggatttttgtccgcaaatatgcagagctg
ggtttttacgaaacgctatcattaacggctaattttattatcattatcattctctgttgg
ggcggttacagggtctttactccccggcgtaacaacgtttcacatggtgatacccgttta
atttcccagcgtatattctggcagattgtgtttcctgcaacgctgtttctgatacttttc
cagtttgctgcatttgtaggattactggcgagcagagaaaatctggtcggtgtcatgcct
tttaacctcgggactttaatcaattatcaggccttactggtgggtaatctgatcggtgtc
ccgctgtgctacttcatcattcgggtagtgcgaaatccattttatttacgtagctattat
tcgcaattaaaacagcaggttgatgccaaagtcaccaaaaaagagttcgcgctctggcta
ctggcattaggtgctttattgttgctgttatgcatgccgttaaatgaaaaaagcacaatt
tttagcaccaattataccttgtcattattgctgcccctgatgatgtggggagcgatgcgc
tatggttataagctgatttcgctgctctgggcggtcgtgttgatgatcagcatccacagc
tatcaaaattacattcccatttatcctggctataccacgcagctgaccataacctcctcc
agttatctggtattctcttttattgtcaattatatggctgtactggcaacccgtcagaga
gcggtagtcagacgcattcagcggcttgcgtatgtggacccggtggttcatctgccaaat
gttcgcgccctgaatcgcgcgttgcgtgatgccccctggtctgcgctttgttatttacgc
atccctggcatggaaatgctggttaagaactatggcatcatgctgcggattcaatacaag
caaaaactttctcactggctgtcacccttgctggaaccgggtgaagatgtttatcagctt
tcgggtaacgatctcgcgctgcgactgaatacagaatcgcaccaggagcgcattaccgca
ctggatagccatctcaagcaatttcgtttcttttgggatggcatgccgatgcaaccgcag
attggcgtcagttactgctatgtgcgctcgccagtgaatcatatctacctgctgctggga
gagctaaatacggtcgccgaactttccatcgtgaccaacgccccggaaaatatgcagcgt
cgcggggcaatgtatttgcaacgcgaattgaaagataaagtcgcgatgatgaatcgacta
cagcaggcgctggaacacaaccattttttcctgatggcccagccgattaccggtatgcgt
ggtgatgtttaccatgaaattcttctgcgcatgaaaggtgagaatgatgaactgatcagc
cccgatagcttcttgccggtcgcgcacgaatttggtttatcgtcgagtatcgacatgtgg
gtcattgagcatacgctgcaatttatggctgaaaacagagcgaagatgcccgctcaccgt
tttgctattaatctgtctccaacctcggtatgtcaggctcgttttcctgttgaagtcagt
cagttgctggctaaatatcagattgaagcgtggcaacttatttttgaagtcaccgaaagt
aatgctctgaccaatgttaagcaggcgcaaatcaccttgcagcatcttcaggaattaggc
tgccagattgcgattgatgatttcggcaccggctacgccagctatgcgcggcttaaaaat
gtgaatgccgatctgcttaaaattgacggcagttttatccgcaatattgtgtcaaatagt
ctggattatcagatagtggcatcgatttgccacctggcgcgaatgaagaaaatgctggta
gtggcagagtacgttgaaaacgaagagatccgcgaggcggtgctctctttggggatcgat
tatatgcagggttatcttattggtaagccgcagccgttaattgatacgctgaatgaaatc
gaacccattcgcgaaagtgcctga
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