Escherichia coli K-12 MG1655: b2808
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Entry
b2808 CDS
T00007
Symbol
gcvA
Name
(RefSeq) DNA-binding transcriptional dual regulator GcvA
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
eco
Escherichia coli K-12 MG1655
Pathway
eco02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
b2808 (gcvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eco03000
]
b2808 (gcvA)
Transcription factors [BR:
eco03000
]
Prokaryotic type
Helix-turn-helix
LysR family
b2808 (gcvA)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
Motif
Other DBs
NCBI-GeneID:
947278
NCBI-ProteinID:
NP_417288
Pasteur:
gcvA
RegulonDB:
RDBECOLIGNC01726
ECOCYC:
EG11795
ASAP:
ABE-0009202
UniProt:
P0A9F6
Structure
PDB
PDBj
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Position
complement(2941650..2942567)
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AA seq
305 aa
AA seq
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MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL
LLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIHWLVPRLSSFNSAY
PGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGEKPL
KTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVALAN
NVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAAAEQEKFR
FRYEQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgattaccaccgctaaatgccttacgagtttttgatgccgcagcacgccat
ttaagtttcactcgcgcagcagaagagctttttgtgacccaagccgcagtaagtcatcaa
atcaagtctcttgaggattttttggggctaaaactgttccgccgccgtaatcgttcactc
ctgctgaccgaggaagggcaaagctatttcctcgatatcaaagagatattttcgcaatta
accgaagcgacgcgtaaactccaggcccgtagcgccaagggggcgttgacggtcagttta
ctccccagtttcgccattcattggttggttccgcgactttccagctttaattcagcttat
ccgggaattgacgttcgaatccaggcggttgatcgtcaggaagataagctggcggatgat
gttgatgtggcgatattttatggtcggggcaactggccggggctacgggtggaaaaactg
tacgccgaatatttattgccggtgtgttcgccgctactgctgactggcgaaaaacccttg
aagacaccggaagatctggctaaacatacgttattacatgatgcttcgcgccgtgactgg
cagacatatacccgacagttggggttaaatcatatcaacgttcagcaagggccaattttt
agccatagcgccatggtgctgcaagcggctatccacgggcagggagtggcgctggcaaat
aacgtgatggcgcaatctgaaatcgaggccggacgtcttgtttgcccgtttaatgatgtt
ctggtcagtaaaaatgctttttatctggtttgtcatgacagtcaggcagaactgggtaaa
atagccgcctttcgccaatggatcctggcgaaagccgctgctgaacaagaaaaattccgc
tttcgttatgaacaataa
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