Escherichia coli K-12 MG1655: b2892
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Entry
b2892 CDS
T00007
Symbol
recJ
Name
(RefSeq) ssDNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
eco
Escherichia coli K-12 MG1655
Pathway
eco03410
Base excision repair
eco03430
Mismatch repair
eco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
b2892 (recJ)
03430 Mismatch repair
b2892 (recJ)
03440 Homologous recombination
b2892 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eco03400
]
b2892 (recJ)
DNA repair and recombination proteins [BR:
eco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
b2892 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
b2892 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
b2892 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PEP-utilizers
Motif
Other DBs
NCBI-GeneID:
947367
NCBI-ProteinID:
NP_417368
Pasteur:
recJ
RegulonDB:
RDBECOLIGNC00820
ECOCYC:
EG10830
ASAP:
ABE-0009492
UniProt:
P21893
LinkDB
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Position
complement(3036373..3038106)
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AA seq
577 aa
AA seq
DB search
MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKA
VEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPE
VVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTDHHLPGDTLPAAEAIINPNLR
DCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERNIAIPNLAELLDLVALGTVADVVPL
DANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQIEALTLCEKLERSRDTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
GMMLKFGGHAMAAGLSLEEDKFKLFQQRFGELVTEWLDPSLLQGEVVSDGPLSPAEMTME
VAQLLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTA
LWPDNGVREVQLAYKLDINEFRGNRSLQIIIDNIWPI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagatacaacttcgtcgccgtgaagtcgatgaaacggcagacttgcccgct
gaattgcctcccttgctgcgccgtttatacgccagccggggagtacgcagtgcgcaagaa
ctggaacgcagtgttaaaggtatgctgccctggcagcaactgagcggcgtcgaaaaggcc
gttgagatcctttacaacgcttttcgcgaaggaacgcggattattgtggtcggtgatttc
gacgccgacggcgcgaccagcacggctctaagcgtgctggcgatgcgctcgcttggttgc
agcaatatcgactacctggtaccaaaccgtttcgaagacggttacggcttaagcccggaa
gtggtcgatcaggcccatgcccgtggcgcgcagttaattgtcacggtggataacggtatt
tcctcccatgcgggggttgagcacgctcgctcgttgggcatcccggttattgttaccgat
caccatttgccaggcgacacattacccgcagcggaagcgatcattaaccctaacttgcgc
gactgtaatttcccgtcgaaatcactggcaggcgtgggtgtggcgttttatctgatgctg
gcgctgcgcacctttttgcgcgatcagggctggtttgatgagcgtaacatcgcaattcct
aacctggcagaactgctggatctggtcgcgctggggacagtggcggacgtcgtgccgctg
gacgctaataatcgcattctgacctggcaggggatgagtcgcatccgagccggaaagtgc
cgtccggggattaaagcgctgcttgaagtggcaaaccgtgatgcacaaaaactcgccgcc
agcgatttaggttttgcgctggggccacgtctcaatgctgccggacgactggacgatatg
tccgtcggtgtggcgctgttgttgtgcgacaacatcggcgaagcgcgcgtgctggcaaat
gaactcgatgcgctaaaccagacgcgaaaagagatcgaacaaggaatgcaaattgaagcc
ctgaccctgtgcgagaaactggagcgcagccgtgacacgctacccggcgggctggcaatg
tatcaccccgaatggcatcagggcgttgtcggtattctggcttcgcgcatcaaagagcgt
tttcaccgtccggttatcgcgtttgcgccagcaggtgacggtacgctgaaaggttccggt
cgctccattcaggggctgcatatgcgtgatgcgctggagcgattagacacactctaccct
ggcatgatgctgaagtttggcggtcatgcgatggcggcgggtttgtcgctggaagaggat
aaattcaaactctttcaacaacggtttggcgaactggttactgagtggctggacccttcg
ctattgcaaggcgaagtggtatcagacggtccgttaagcccggccgaaatgaccatggaa
gtggcgcagctgctgcgcgatgctggcccgtgggggcagatgttcccggagccgctgttt
gacggtcatttccgtctgctgcaacagcggctggtgggcgaacgtcatttgaaggtgatg
gtcgaaccggtcggcggcggtccactgctggatggtattgcttttaatgtcgataccgcc
ctctggccggataacggcgtgcgcgaagtgcaactggcttataagctcgatatcaacgag
tttcgcggcaaccgcagcctgcaaattatcatcgacaatatctggccaatttag
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