Escherichia coli K-12 MG1655: b2894
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Entry
b2894 CDS
T00007
Symbol
xerD
Name
(RefSeq) site-specific recombinase
KO
K04763
integrase/recombinase XerD
Organism
eco
Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eco03036
]
b2894 (xerD)
Chromosome and associated proteins [BR:
eco03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
b2894 (xerD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF2064
Motif
Other DBs
NCBI-GeneID:
947362
NCBI-ProteinID:
NP_417370
Pasteur:
xerD
RegulonDB:
RDBECOLIGNC01059
ECOCYC:
EG11071
ASAP:
ABE-0009500
UniProt:
P0A8P8
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(3038847..3039743)
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AA seq
298 aa
AA seq
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MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLA
ERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVER
LLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVP
LGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaggatctggcacgcatcgagcagtttcttgatgctctgtggctggaaaaaaat
ctggctgaaaatacgttgaacgcttaccgtcgcgatctgtcaatgatggtggagtggttg
catcaccgcgggttgacgctggcgacggcgcaaagtgacgatttgcaggcattactggca
gaacggctggagggcgggtataaagccaccagctcagcgcgtttgctgagtgcagtgcgc
cgattgttccagtatctttatcgcgaaaagtttcgtgaagacgatcccagtgcgcatctc
gcttcaccgaaattgccccagcgtttgccaaaagatttaagcgaagcgcaggtcgaacgt
ttattacaggcaccattaatcgatcagccactggagctacgcgataaagccatgcttgaa
gtgttgtatgctaccgggctgcgtgtctctgaactggtcggactgacaatgagtgatatc
agcctgcgtcagggcgtggtacgggtcattggtaaaggcaacaaagagcgtctggtgccg
ttaggtgaagaggcggtttactggctggaaacctatctggaacatgggcgtccgtggctg
ctgaatggtgtgtcaattgacgtgttgtttcccagccagcgtgcgcagcagatgacgcga
cagaccttctggcaccgtattaaacattatgctgtgctggcgggtatcgacagcgaaaag
ctgtcaccgcatgtgttgcgtcacgcttttgccactcatttattaaatcatggtgcggat
ttacgcgtggtgcagatgctactgggccacagcgatctctccaccacgcaaatttatacg
catgtcgctaccgagcgtctgcggcaacttcatcaacagcatcacccgcgggcgtga
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