Escherichia coli K-12 MG1655: b3461
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Entry
b3461 CDS
T00007
Symbol
rpoH
Name
(RefSeq) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
eco
Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eco03021
]
b3461 (rpoH)
Transcription machinery [BR:
eco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
b3461 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
HTH_25
HTH_3
SANT_DAMP1_like
WASH_WAHD
2Fe-2S_thioredx
Motif
Other DBs
NCBI-GeneID:
947970
NCBI-ProteinID:
NP_417918
Pasteur:
rpoH
RegulonDB:
RDBECOLIGNC00887
ECOCYC:
EG10897
ASAP:
ABE-0011303
UniProt:
P0AGB3
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(3599929..3600783)
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AA seq
284 aa
AA seq
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MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAAKTLILSHLRF
VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDM
TFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDII
RARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaatgcaaagtttagctttagccccagttggcaacctggattcctacatc
cgggcagctaacgcgtggccgatgttgtcggctgacgaggagcgggcgctggctgaaaag
ctgcattaccatggcgatctggaagcagctaaaacgctgatcctgtctcacctgcggttt
gttgttcatattgctcgtaattatgcgggctatggcctgccacaggcggatttgattcag
gaaggtaacatcggcctgatgaaagcagtgcgccgtttcaacccggaagtgggtgtgcgc
ctggtctccttcgccgttcactggatcaaagcagagatccacgaatacgttctgcgtaac
tggcgtatcgtcaaagttgcgaccaccaaagcgcagcgcaaactgttcttcaacctgcgt
aaaaccaagcagcgtctgggctggtttaaccaggatgaagtcgaaatggtggcccgtgaa
ctgggcgtaaccagcaaagacgtacgtgagatggaatcacgtatggcggcacaggacatg
acctttgacctgtcttccgacgacgattccgacagccagccgatggctccggtgctctat
ctgcaggataaatcatctaactttgccgacggcattgaagatgataactgggaagagcag
gcggcaaaccgtctgaccgacgcgatgcagggtctggacgaacgcagccaggacatcatc
cgtgcgcgctggctggacgaagacaacaagtccacgttgcaggaactggctgaccgttac
ggcgtttccgctgagcgtgtacgccagctggaaaagaacgcgatgaaaaaattgcgtgct
gccattgaagcgtaa
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