Escherichia coli K-12 MG1655: b4062
Help
Entry
b4062 CDS
T00007
Symbol
soxS
Name
(RefSeq) DNA-binding transcriptional dual regulator SoxS
KO
K13631
AraC family transcriptional regulator, mar-sox-rob regulon activator
Organism
eco
Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eco03000
]
b4062 (soxS)
Transcription factors [BR:
eco03000
]
Prokaryotic type
Helix-turn-helix
AraC family
b4062 (soxS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-GeneID:
948567
NCBI-ProteinID:
NP_418486
Pasteur:
soxS
RegulonDB:
RDBECOLIGNC00946
ECOCYC:
EG10958
ASAP:
ABE-0013311
UniProt:
P0A9E2
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(4277060..4277383)
Genome browser
AA seq
107 aa
AA seq
DB search
MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL
LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatcagaaaattattcaggatcttatcgcatggattgacgagcatattgaccag
ccgcttaacattgatgtagtcgcaaaaaaatcaggctattcaaagtggtacttgcaacga
atgttccgcacggtgacgcatcagacgcttggcgattacattcgccaacgccgcctgtta
ctggccgccgttgagttgcgcaccaccgagcgtccgatttttgatatcgcaatggacctg
ggttatgtctcgcagcagaccttctcccgcgttttccgtcggcagtttgatcgcactccc
agcgattatcgccaccgcctgtaa
DBGET
integrated database retrieval system
