Escherichia coli K-12 MG1655: b4372
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Entry
b4372 CDS
T00007
Symbol
holD
Name
(RefSeq) DNA polymerase III subunit psi
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
eco
Escherichia coli K-12 MG1655
Pathway
eco03030
DNA replication
eco03430
Mismatch repair
eco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
b4372 (holD)
03430 Mismatch repair
b4372 (holD)
03440 Homologous recombination
b4372 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eco03032
]
b4372 (holD)
03400 DNA repair and recombination proteins [BR:
eco03400
]
b4372 (holD)
Enzymes [BR:
eco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
b4372 (holD)
DNA replication proteins [BR:
eco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
b4372 (holD)
DNA repair and recombination proteins [BR:
eco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
b4372 (holD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_III_psi
CSTF_C
Motif
Other DBs
NCBI-GeneID:
948890
NCBI-ProteinID:
NP_418789
Pasteur:
holD
RegulonDB:
RDBECOLIGNC01379
ECOCYC:
EG11414
ASAP:
ABE-0014340
UniProt:
P28632
Structure
PDB
PDBj
LinkDB
All DBs
Position
4607803..4608216
Genome browser
AA seq
137 aa
AA seq
DB search
MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRA
LTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAA
LWQQICTYEHDFFPRND
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccgacgagactggcagttacagcaactgggcattacccagtggtcgctgcgt
cgccctggcgcgttgcagggggagattgccattgcgatcccggcacacgtccgtctggtg
atggtggcaaacgatcttcccgccctgactgatcctttagtgagcgatgttctgcgcgca
ttaaccgtcagccccgaccaggtgctgcaactgacgccagaaaaaatcgcgatgctgccg
caaggcagtcactgcaacagttggcggttgggtactgacgaaccgctatcactggaaggc
gctcaggtggcatcaccggcgctcaccgatttacgggcaaacccaacggcacgcgccgcg
ttatggcaacaaatttgcacatatgaacacgatttcttccctcgaaacgactga
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