Escherichia coli APEC O78 (APEC): APECO78_04250
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Entry
APECO78_04250 CDS
T02445
Name
(GenBank) carbohydrate diacid transcriptional activator CdaR
KO
K02647
carbohydrate diacid regulator
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoa03000
]
APECO78_04250
Transcription factors [BR:
ecoa03000
]
Prokaryotic type
Helix-turn-helix
Other families
APECO78_04250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
AGC85587
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Position
883901..885058
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AA seq
385 aa
AA seq
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MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV
VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR
LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS
AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE
YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG
DWQANELARPLARLKAMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE
LTGLDLGNFDDRLLLYVALQLDEER
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggctggctggcatcttgataccaaaatggcgcaggatatcgtggcacgtaccatgcgc
atcatcgataccaatatcaacgtaatggatgcccgtgggcgaattatcggcagcggcgat
cgtgagcgtattggtgaattgcacgaaggtgcattgctggtactttcacagggacgagtc
gtcgatatcgatgacgcggtggcacgtcatctgcacggtgtgcggcaagggattaatcta
ccgttacggctggaaggtgaaattgtcggcgtaattggcctgacaggtgaaccagagaat
ctgcgtaaatatggcgaactggtctgcatgacggctgaaatgatgctggaacagtcgcgg
ttgatgcacttgttggctcaggatagccgtttgcgggaggaactggtgatgaacctgatt
caggcagaggagaatactcccgcacttactgaatgggcgcaacggctggggatcgatctc
aatcaaccgcgagtggtggctattgttgaggtcgacagcggtcagcttggtgtggacagc
gcaatggcggagttacaacaactgcaaaacgcgctgactacgcccgagcgtaataatctg
gtggcgattgtctcgctaaccgaaatggtggtgttgaaaccggcgttgaactcttttggg
cgctgggatgcagaagatcatcgtaagcgagttgaacaactgattacccgcatgaaagag
tacggccagctgcgttttcgcgtttcactgggcaactattttaccggtcctggcagtatt
gcccgatcctatcgtacggcgaaaacgacgatggtggtgggtaaacagcggatgccagaa
agtcgctgctatttttatcaggatctgatgttacctgtgttactcgacagtttgcgtggc
gactggcaggccaacgaactggcgcgaccgctggcgcggctgaaagcgatggacaataac
ggcttgctgcgacgaacgctggcggcgtggtttcgtcacaatgtgcaaccgctggcaacg
tcaaaggcgttgtttattcatcgtaatactctggagtatcggcttaatcgtatatcggaa
ctgaccgggcttgatttgggtaattttgatgacaggttgctgctgtatgtggcgttgcag
ctggatgaagagcggtag
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