Escherichia coli APEC O78 (APEC): APECO78_05090
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Entry
APECO78_05090 CDS
T02445
Name
(GenBank) transcriptional regulator BetI
KO
K02167
TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoa03000
]
APECO78_05090
Transcription factors [BR:
ecoa03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
APECO78_05090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_6
TetR_N
LacI
DUF1744
VCPO_2nd
HTH_3
CetZ_C
TetR_C_28
Motif
Other DBs
NCBI-ProteinID:
AGC85755
LinkDB
All DBs
Position
complement(1043343..1043930)
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AA seq
195 aa
AA seq
DB search
MPKLGMQSIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFRDKNGLLEAT
MRDITSQLRDAVLNRLHALPQGSAEQRLQAIVAGNFDETQVSSAAMKAWLAFWASSMHQP
MLYRLQQVSSRRLLSNLVSEFRRELPREQAQEAGYGLAALIDGLWLRAALSGKPLDKPLA
HSLTRHFITQHLPTD
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaattggggatgcagtcgatccggcgcagacaactgatcgacgccacactggaa
gcaataaatgaagtgggcatgcacgatgcaacgatcgcgcagatcgcccgccgtgcaggc
gtttctacggggatcatcagccactatttcagggacaaaaatggtctgctggaagcaacc
atgcgcgacatcaccagtcagttacgtgacgcggttttgaatcgattacatgcacttccg
cagggcagtgcagagcagcgattacaggcgattgttgccggaaacttcgatgaaactcag
gtgagcagtgcggcgatgaaagcctggctggcgttctgggccagcagtatgcatcagccg
atgctctatcgtttacagcaggtcagcagccgccgcttgctgtcgaatctggtgagcgag
tttcgccgcgaattgccgcgcgaacaggcacaggaagcgggctacggccttgccgcgctg
attgacggattatggctgcgcgcggcactgagcggcaaaccgctggataaacctctcgca
cactcgctgacccgtcactttattactcagcatttacccaccgattaa
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