Escherichia coli APEC O78 (APEC): APECO78_05495
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Entry
APECO78_05495 CDS
T02445
Name
(GenBank) Nuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecoa03400
]
APECO78_05495
DNA repair and recombination proteins [BR:
ecoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
APECO78_05495
Archaeal homologous recombinant proteins
APECO78_05495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AGC85834
LinkDB
All DBs
Position
complement(1127500..1128702)
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AA seq
400 aa
AA seq
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MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR
TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG
TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII
ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS
PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS
QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL
SVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatccttcacacctcagactggcatctcggccagaacttctacagtaaaagccgc
gaagctgaacatcaggcttttcttgactggctgctggagacagcacaaacccatcaggtg
gatgcgattattgttgctggtgatgttttcgataccggctcgccgcccagttacgcccgc
acgttatacaaccgttttgttgtcaatttacagcaaactggctgtcatctggtggtactg
gcaggaaaccatgactcggtcgccacgctgaatgaatcgcgcgatatcatggcgttcctc
aatactaccgtggtcgccagcgccggacatgcgccgcaaatcttgcctcgtcgcgacggg
acgccaggcgcagtgctgtgccccattccgtttttacgtccacgtgacattattaccagc
caggcggggcttaacggtattgaaaaacagcagcatttactggcagcgattaccgattat
taccaacaacactatgccgatgcctgcaaactgcgcggcgatcagcctctgcccatcatc
gccacgggacatttaacgaccgtgggggccagtaaaagtgacgccgtgcgtgacatttat
attggcacgctggacgcgtttccggcacaaaactttccaccagccgactacatcgcgctc
gggcatattcaccgcgcacagattattggcggcatggaacatgttcgctattgcggctcc
cccattccactgagttttgatgaatgcggtaagagtaaatatgtccatctggtgacattt
tcaaacggcaaattagagagcgtggaaaacctgaacgtaccggtaacgcaacccatggca
gtgctgaaaggcgatctggcgtcgattaccgcacagctggaacagtggcgcgatgtatca
caggagccgcctgtctggctggatatcgaaatcactactgatgagtatctgcatgatatt
cagcgcaaaatccaggcattaaccgaatcattgcctgttgaagtattgctggtacgccgg
agtcgtgaacagcgcgagcgtgtgttagccagccaacagcgtgaaaccctcagcgaactc
agcgtcgaagaggtgttcaatcgccgtctggcactggaagaactggatgaatcgcagcag
caacgtctgcagcatcttttcaccacgacgttgcataccctcgccggagaacacgaagca
tga
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