Escherichia coli APEC O78 (APEC): APECO78_06025
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Entry
APECO78_06025 CDS
T02445
Name
(GenBank) DNA-binding transcriptional repressor AllR
KO
K10973
IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoa03000
]
APECO78_06025
Transcription factors [BR:
ecoa03000
]
Prokaryotic type
Helix-turn-helix
IclR family
APECO78_06025
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
HTH_5
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AGC85940
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Position
1237969..1238784
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AA seq
271 aa
AA seq
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MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVSDISLNLDLPLSTTFRL
LKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVAGPFMRRLMLLSGETVNVA
IRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKALLYPLAEEELMSIILQTGLQQ
FTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCIASAIYDDVGSVVAAISISGPSS
RLTEDRFVSQGELVRDTARDISTALGLKAHP
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagttagacggcgcggcaggccaggacaggcggagcctgtggcacagaagggc
gcacaggcgttagagcggggaattgcgattctgcaatatctggaaaaaagtgggggaagt
tcgtcggttagcgatatttctctcaatctggatttgccgctctccacgacctttcgcttg
ctgaaggttttacaggcagcggattttgtctatcaggacagtcagttaggctggtggcat
ataggattaggtgtctttaacgtcggtgcggcgtacatccataaccgcgatgtcctctcc
gtcgccgggccgtttatgcgccgcctgatgttactttccggcgaaacggtcaatgtcgcg
atccgtaacggcaatgaagcagtattaattggtcagctagagtgtaaatcgatggtcagg
atgtgtgcgccactgggcagtcgtctgccactgcatgcttccggtgcgggcaaagcgctg
ctttatccgctggcggaagaggagttgatgagcatcattctgcaaaccggtttgcagcag
tttacgccaactacgcttgtggatatgcccaccttactgaaggacctggagcaagcgcgt
gaactgggctataccgtagataaagaagagcatgttgtaggtctgaattgcatagcttca
gcaatttacgatgatgtaggtagtgttgttgccgctatctccatctccgggccttcatca
agactgacagaagatcgttttgtcagtcagggtgagctggtcagagacaccgcccgcgat
atcagcacggcgttgggactgaaagcacatccatag
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