Escherichia coli APEC O78 (APEC): APECO78_08540
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Entry
APECO78_08540 CDS
T02445
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecoa03032
]
APECO78_08540
03036 Chromosome and associated proteins [BR:
ecoa03036
]
APECO78_08540
03400 DNA repair and recombination proteins [BR:
ecoa03400
]
APECO78_08540
DNA replication proteins [BR:
ecoa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
APECO78_08540
Chromosome and associated proteins [BR:
ecoa03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
APECO78_08540
DNA repair and recombination proteins [BR:
ecoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
APECO78_08540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_euk_1
MDMPI_C
FhbB
Motif
Other DBs
NCBI-ProteinID:
AGC86439
LinkDB
All DBs
Position
1750895..1751179
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AA seq
94 aa
AA seq
DB search
MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaattgatagaaagacttgccacccagcaatcgcacattcccgccaag
acggttgaagatgcagtaaaagagatgctggagcatatggcctcgactcttgcgcagggc
gagcgtattgaaatccgcggtttcggcagtttctctttgcactaccgcgcaccacgtacc
ggacgtaatccgaagactggcgataaagtagaactggaaggaaaatacgttcctcacttt
aaaccaggtaaagaactgcgcgatcgcgccaatatttacggttaa
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integrated database retrieval system
