Escherichia coli APEC O78 (APEC): APECO78_11000
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Entry
APECO78_11000 CDS
T02445
Name
(GenBank) RhsE core protein
Organism
ecoa
Escherichia coli APEC O78 (APEC)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
RHS
PAAR_motif
Motif
Other DBs
NCBI-ProteinID:
AGC86929
LinkDB
All DBs
Position
2263723..2267943
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AA seq
1406 aa
AA seq
DB search
MSGKPAARQGDMTQYGGPIVQGSAGVRIGAPTGVACSVCPGGMTSGNPVNPLLGAKVLPG
ETDLALPGPLPFILSRTYSSYRTKTPAPVGVFGPGWKAPSDIRLQLRDDGLILNDNGGRS
IHFEPLLPGEAVYSRSESMWLVRGGKAAQPDGHTLARLWGALPPDIRLSPHLYLATNSAQ
GPWWILGWSERVPGAEDVLPAPLPPYRELTGLADRFGRTLTYRREAAGDLTGEITGVTDG
AGREFRLVLTTQAQRAEEARTSSLSSSDSSRPLSASAFPDTLPGTEYGPDRGIRLSAVWL
MHDPAYPESLPAAPLVRYTYTEAGELLAVYDRSNTQVRAFTYDAQHPGRMVAHRYAGRPE
MRYRYDDAGRVVEQLNPAGLSYRYQYEQDRITVTDSLNRREVLHTEGGAGLKRVVKKELA
DGSVTHSGYDAAGRLTAQTDAAGRRTEYGLNVVSGDITDITTPDGRETKFYYNDGNQLTA
VVSPDGLESRREYDEPGRLVSETSRSGETVRYRYDDAHSELPATTTDATGSTRQMTWSRY
GQLLAFTDCSGYQTRYEYDRFGQMTAVHREEGISLYRHYDNRGRLTSVKDAQGRETQYEY
NAAGDLTAVITPDGNRSETQYDAWGKAVSTTQGGLTRSMEYDAAGRVISLTNENGSHSDF
SYDALDRLVQQGGFDGRTQRYHYDLTGKLTQSEDEGLVTLWYYDESDRITHRTVNGEPAE
QWQYDDHGWLTDISHLSEGHRVAVHYGYDDKGRLTGERQTVENPETGELLWQHETTHAYN
EQGLANRVTPDSLPPVEWLTYGSGYLAGMKLGDTPLLEYTRDRMHRETVRSFGSMAGSNA
AYKLTSTYTPAGQLQSQHLNSLVYDRDYGWNDNGDLVRISGPRQTREYGYSATGRLESVR
TLAPDLDIRIPYATDPAGNRLPDPELHPDSTLTAWPDNRIAEDAHYVYHYDEYGRLTEKT
DLIPAGVIRTDDERTHHYHYDSQHRLVFYTRIQHGEPLVESRYLYDPLGRRMAKRVWRRE
RDLTGWMSLSRKPEVTWYGWDGDRLTTVQTDTTRIQTVYQPGSFAPLIRIETDNGEREKA
QRRSLAEKLQQEGSEDGHGVVFPAELVRLLDRLEEEIRADRVSSESRVWLAQCGLTVEQL
ARQVEPEYTPARKVHFYHCDHRGLPLALISEDGNTVWSAEYDEWGNQLNEENPYYLYQPY
RLPGQQYDEESGLDYNRHRYYDPLQGRYITQDPIGLAGGWSLYAYPLNPVQHVDPLGLST
MIIGNGPVPDNPFGHAAAANRYGLMSSGTGDEMGASVSDYFKKMQPRRDTWIWIIDTTDE
EEQCMMNKAIDLNKKLKTINLGPLPVANNCFSRTNMIFEACGFSNPSMNTNAPISLQVLG
ELYGYQRYFMPKGPFTGFPFEFQEVK
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaaaaccagcggcgcgtcagggagatatgactcagtatggcggtcccattgtc
cagggttcggcaggtgtaagaattggcgcgcccaccggcgtggcgtgctcggtgtgtccg
ggcgggatgacttcgggcaacccggtaaatccgctgcttggggcgaaggtgctgcccggc
gagacggaccttgcgctgcccggcccgctgccgttcattctctcccgcacctacagcagc
taccggacgaagacgcctgcaccggtgggcgttttcggccccggctggaaagcgccttct
gatatccgcttacagctacgtgatgacggactgatactcaacgacaacggcgggcggagc
attcactttgagccgctgctgccgggggaggcggtgtacagccgcagtgagtcaatgtgg
ctggtgcgcggtggtaaggcagcacagccggacggccatacgctggcgcggctgtggggg
gcgctgccgccggatatccggttaagcccgcatctttacctggcgaccaacagcgcacag
gggccgtggtggatactcggctggtcagagcgggtgccgggtgctgaggacgtgctgcca
gcgccgctgccgccgtaccgggagctgacggggctggcggaccgcttcgggcggacgctg
acgtaccggcgtgaggccgccggtgacctgaccggggaaatcaccggcgtgacggacggt
gccgggcgggagttccgtctggtgctgaccacgcaggcgcagcgtgcggaagaggcccgc
acctcttcgctatcttcttctgacagttcccgccctctctcagcctcagcgttccccgac
acactgcccggtaccgaatacggccccgacaggggtatccgcctttcggcggtgtggctg
atgcacgacccggcatacccggagagcctgcccgctgcgccactggtgcggtacacatat
acggaagccggtgaactgctggcggtatatgaccgcagcaatacgcaggtgcgcgctttc
acgtatgacgcgcagcacccgggccggatggtggcgcaccgttatgcaggcaggccggag
atgcgctaccgctacgacgatgcggggcgggtggtggagcaacttaacccggcaggcctg
agttaccgctaccagtatgagcaggatcgcatcaccgtcacggacagcctgaaccggcgt
gaggtgctgcatacagaaggcggggccgggctgaagcgggtggtgaaaaaagaactggcg
gacggcagcgtcacgcacagcgggtatgacgcggcaggaaggctcacggcgcagacggat
gcggcgggacggcggacagagtacggtctgaatgtggtgtcaggcgatatcacggacatc
accacgccggacgggcgggagacgaaattttactataacgacgggaaccagctgacggcg
gtggtgtccccggacgggctggagagccgccgggaatatgatgaaccgggcaggctggta
tcggagacatcgcgcagcggggagacagtacgctaccgctacgatgacgcgcacagtgag
ttaccggcgacgacaacggatgcgacgggcagcacccggcagatgacgtggagccgctac
gggcagttgctggcgttcactgactgctcgggctaccagacccgctatgaatacgaccgc
ttcggccagatgacggcggttcaccgcgaggaaggtatcagcctttaccgccactatgac
aaccgtggccggttaacctcggtgaaagacgcacagggccgtgaaacgcagtatgagtac
aacgccgcaggcgacctgactgccgttatcaccccggacggcaaccggagcgagacacag
tacgatgcgtggggaaaggcggtcagcaccacgcagggcgggctgacgcgcagtatggag
tacgatgctgccggacgtgtcatcagtctgactaacgagaacggcagccacagcgacttc
agctacgatgcgctggaccggttggtacagcagggcggctttgacgggcggacgcaacgt
tatcattatgacctgaccggaaaactcacgcagagtgaagatgaggggcttgtcaccctc
tggtactacgatgaatcggaccgtatcactcaccgcacggtgaacggcgaaccggcagag
cagtggcagtatgatgaccacggctggctgacagacatcagccacctgagcgaaggccac
cgtgtcgctgtccactacggctacgacgataagggccgcctgaccggcgaacggcagacg
gtggagaacccggagacgggggaactgctgtggcagcatgagacaacacacgcctacaac
gaacaggggctggcaaaccgcgtcacgccggacagcctgccgccggtggagtggctgacc
tacggcagcggttatctggcgggcatgaagcttggcgacacgccgctgctggagtacacg
cgcgaccgcatgcaccgggagacggtgcgcagctttggcagcatggcaggcagtaatgcc
gcatataaactgaccagcacatacacccccgcaggccagttacagagccagcacctgaac
agcctggtgtatgaccgtgactacgggtggaatgacaacggcgacctggtgcgcatcagc
ggcccgcgacagacgcgggaatacggctacagcgccacgggcaggctggagagcgtgcgt
accctcgcaccggacctggacatccgcatcccgtatgccaccgacccggcgggaaaccgc
ctgccggacccggagctgcacccggacagtaccctcacggcgtggccggataaccgcatc
gcagaggatgcgcactatgtttaccactatgatgaatacggcagactgacggagaagacg
gaccttatcccggcgggtgttatccggacggacgacgagcggacccaccactaccactac
gacagccagcaccgtctggtgttctacacgcggatacagcatggcgagccactggtcgag
agccgctacctctacgacccgctgggacggcgaatggcgaaacgggtatggcggcgggag
cgtgacctgacggggtggatgtcgctgtcgcgtaaaccggaggtgacgtggtacgggtgg
gacggcgaccggctgacgacggtacagaccgacaccacgcgtatccagacggtatatcag
ccggggagcttcgcgccgctcatccgcatcgaaacagacaacggtgagcgggagaaagcg
cagcgccgcagcctggcggagaagctgcagcaggaagggagcgaggacgggcacggcgtg
gtatttccggctgaactggtgcggctgctggacagactggaggaagaaatccgggcagac
cgcgtgagcagtgaaagccgggtgtggcttgcgcagtgcgggctgacggtggagcaactg
gccagacaggtggagccggaatacacaccggcgcgaaaagttcatttttaccactgcgac
caccggggcctgccgctggcgctcatcagcgaagacggcaatactgtgtggagtgcagaa
tacgatgaatggggcaaccagctgaatgaagagaacccgtattacctgtatcagccatac
cgtctgccagggcagcagtacgatgaggagtcggggctggattataaccgtcaccggtac
tacgatccgttgcaggggcggtatatcacccaggacccgattgggctggcggggggatgg
agtctgtatgcgtatccgctgaatccagtgcaacacgttgatccattagggcttagtact
atgataataggtaacggccccgttcctgataatccttttgggcatgctgcggcggcaaat
cgatatggattaatgagttcgggaactggggatgagatgggagcctctgtctctgattat
tttaaaaagatgcaaccccgcagagatacctggatttggataatagatacaacagatgaa
gaagaacaatgtatgatgaataaggcaatagaccttaataaaaaactaaaaactattaac
ctcgggcctcttcctgttgcaaataattgttttagccggacgaacatgatttttgaggcg
tgcgggtttagcaacccctctatgaatacaaatgcgcctataagcctacaagtgctcggt
gagttatatggatatcaaagatattttatgcctaaaggtcctttcactggattcccattt
gaatttcaagaggtaaagtaa
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