Escherichia coli APEC O78 (APEC): APECO78_11325
Help
Entry
APECO78_11325 CDS
T02445
Name
(GenBank) autoinducer 2-binding protein lsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Pathway
ecoa02010
ABC transporters
ecoa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
APECO78_11325
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APECO78_11325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecoa02000
]
APECO78_11325
Transporters [BR:
ecoa02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
APECO78_11325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
DUF6848
Glyco_tran_WecG
Motif
Other DBs
NCBI-ProteinID:
AGC86994
LinkDB
All DBs
Position
2347170..2348192
Genome browser
AA seq
340 aa
AA seq
DB search
MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV
TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK
PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK
EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIVPDANALPAAAQAAENLKNDKV
AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIQGVG
QVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgacacttcatcgctttaagaaaatcgccttacttagcgctcttggcattgccgcaatc
tctatgaatgtgcaggccgcagagcgtattgcatttattcccaaactggttggcgtggga
ttttttaccagcggtggcaacggcgcacaacaagcgggtaaagagctgggcgttgatgtg
acctacgacgggccgacagaacccagtgtttctggtcaggtacagttgattaataacttc
gtcaatcaaggttataacgccattatcgtttctgcggtttcgcctgatggcttgtgtccg
gcactgaaacgcgccatgcaacgtggtgtgagagtgctgacctgggactctgatactaaa
ccggagtgccgctcttactacattaatcagggaacgcccgcccagttgggaggtatgttg
gtggatatggcggcgcgtcaggtgaataaagacaaagccaaagtcgcgtttttctactca
agccccaccgttacggaccaaaaccagtgggtgaaagaagcgaaagcgaaaatcgccaaa
gagcatccaggctgggaaattgtcactacgcagtttggctataacgatgccactaaatcg
ttacaaacagcagaaggaatattaaaagcgtatagcgatctcgacgccattatcgtcccc
gatgccaacgccctgcccgctgccgcacaagccgcagaaaacctgaaaaatgacaaagta
gcgattgtcggattcagtacgccaaatgtgatgcgcccgtatgtagagcgcggcacggtg
aaagaatttggcctgtgggatgtggttcagcaaggcaaaatttcagtgtatgtcgcggat
gcattattgaaaaaaggatcaatgaaaacgggcgacaagctggatatccagggagtaggt
caggtggaagtctcgccaaacagcgttcagggctatgactacgaagcggatggtaatggc
atcgtactgttaccggagcgcgtgatattcaacaaagagaatatcggcaaatacgatttc
tga
DBGET
integrated database retrieval system
