Escherichia coli APEC O78 (APEC): APECO78_11440
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Entry
APECO78_11440 CDS
T02445
Name
(GenBank) transcriptional regulator
KO
K03482
GntR family transcriptional regulator, glv operon transcriptional regulator
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoa03000
]
APECO78_11440
Transcription factors [BR:
ecoa03000
]
Prokaryotic type
Helix-turn-helix
GntR family
APECO78_11440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_11
HTH_Crp_2
HTH_41
HTH_17
Rrf2
DUF4423
HTH_28
AviRa
HTH_36
HTH_29
HTH_12
RADX
HTH_24
MarR
Motif
Other DBs
NCBI-ProteinID:
AGC87017
LinkDB
All DBs
Position
2368358..2369056
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AA seq
232 aa
AA seq
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MIFQKIARLLKSEINGNSWHVGDLLPSEAELAVRYNVSRNTLRKALSLLEGEGIIHRKHG
SGTYIQKKNFVAHIDHMNSFSEIAHKSGKEAGSQIMKFEVQDASPTIATELNLVTGEQVY
YIKRLRFIEDNAAQLEETWMSVARFPDLTVSHMQKSKFSYIENECGIKIIGTFETFSPTF
PTPEIASILRISPRDPILKIQTQAVDSNSIPLDYSLLYSNIFEFQVKYFFPR
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
gtgatttttcaaaagattgcccgcttacttaaatccgaaatcaatggcaattcatggcat
gttggtgatttgttgccgtcagaagcggaactcgctgttcgttataatgtttcgcgtaat
accctgcgtaaggcattatccttgctggaaggcgaaggaattattcacagaaagcatggt
tcaggaacatacattcaaaaaaagaattttgttgcacacattgatcacatgaacagtttc
agtgaaattgcgcataaaagcggcaaagaggcagggagtcagattatgaaatttgaagtg
caggatgcttcacccactattgcgactgagctgaatttagtgactggtgagcaggtttat
tacataaagagactgcgattcattgaggataatgcagcacaattagaagaaacgtggatg
tcagtagcacgttttcctgatttaaccgtgtcacatatgcaaaaatccaaattttcatat
attgagaatgaatgcgggatcaaaatcattggcacctttgaaactttctcccctactttt
cctaccccagaaatcgccagtattttacggatcagcccacgggatcccatacttaaaatt
cagacccaggctgtggacagtaactctattccgctggattattcgttactttacagcaat
attttcgagttccaggtaaagtactttttcccgcgataa
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