Escherichia coli APEC O78 (APEC): APECO78_11695
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Entry
APECO78_11695 CDS
T02445
Name
(GenBank) defective integrase; Qin prophage
KO
K14059
integrase
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
APECO78_11695
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arm-DNA-bind_2
Phage_integrase
Phage_int_SAM_3
Phage_int_SAM_5
Int_N
Motif
Other DBs
NCBI-ProteinID:
AGC87068
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Position
2409658..2410953
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AA seq
431 aa
AA seq
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MREVEMKYPTGVENHGGKLRIWFVYKGVRVRENLGVPDTAKNRRVAGELRASVCYAIKTG
VFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSII
GEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVD
NGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELC
ALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKE
HIIDVHLREYGRTEKHKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKS
YQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFA
PTMPHNEAMKN
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagttgaaatgaaatatccgacaggcgtggaaaaccatggagggaaattacgt
atctggtttgtttataaaggcgtaagagtcagggaaaacctgggggttcctgacacagca
aaaaacaggcgcgttgcaggtgagctacgcgcctctgtttgttacgcaataaaaactggt
gttttcgactatgcaaaacagtttccctcctcacgcaatctggaaaaatttggtgaggcc
cgacaagatttaaccataaaagaactggctgaaaaatttctggcactgaaagaaactgaa
gtcgcaaaaacatcactcaacacataccgtgccgtcatcaaaaatatcctgagcataatc
ggtgaaaaaaatcttgcctcatcgattaataaagaaaaattactggaggttcgtaaagag
ctactgactggataccagatccccaaaagtaactatattgttacacaaccagggagatcg
gctgtaactgtaaataattacatgacaaatcttaacgccgtgttccagtttggtgttgat
aacggttacctggcagataacccgtttaaggggatctcgccattaaaggaatcaagaacc
attccggatcctctttcgcgggaggaattcatccgtcttatcgatgcgtgcagaaatcag
caagccaaaaatttatggtgtgtttctgtttatactggcgttcgccctggtgagctgtgt
gcacttggatgggaggacatagatctgaaaaatggaacaatgatgatcaggagaaattta
gcaaaagaccgtttcacggtaccaaaaacacaggcgggaaccaatcgggtcattcatctt
attaagccagcaatcgacgctctccggagtcagatgacattaacgagactgagcaaagag
catatcattgatgttcacctcagagagtatggcagaacagaaaaacataaatgcaccttt
gtttttcaacctgaagtgtcagcgagagtaaaaaattatggtgaccattttaccgttgac
tcaataaggcagatgtgggacgcagcgataaaacgtgccggactccgccatcgaaaatca
tatcagtcgagacatacttatgcctgctggtcgctgacagctggtgctaacccagcattt
atagcaaaccagatgggccatgcagatgcgcaaatggtatttcaggtatacggaaaatgg
atgtctgaaaacaataatgcacaggtagctttgttaaatacacagttaagcgagtttgcc
ccaaccatgccccataacgaagcaatgaaaaattaa
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