Escherichia coli APEC O78 (APEC): APECO78_13395
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Entry
APECO78_13395 CDS
T02445
Symbol
fliA
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Pathway
ecoa02020
Two-component system
ecoa02026
Biofilm formation - Escherichia coli
ecoa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
APECO78_13395 (fliA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
APECO78_13395 (fliA)
09142 Cell motility
02040 Flagellar assembly
APECO78_13395 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecoa03021
]
APECO78_13395 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ecoa02035
]
APECO78_13395 (fliA)
Transcription machinery [BR:
ecoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
APECO78_13395 (fliA)
Bacterial motility proteins [BR:
ecoa02035
]
Flagellar system
Flagellar assembly proteins
Stator
APECO78_13395 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
UPF0147
TFIIE_alpha
UPF0122
ThiD2
SapB_1
Motif
Other DBs
NCBI-ProteinID:
AGC87408
LinkDB
All DBs
Position
complement(2749215..2749934)
Genome browser
AA seq
239 aa
AA seq
DB search
MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAIGKLEQELGRNATETEV
AERLGIDIANYRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQRENPLQQLLDSNLRQ
RVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaattcactctataccgctgaaggtgtaatggataaacactcgctgtggcagcgttat
gtcccgctggtgcgtcacgaagcattgcgcctgcaggttcgactgcccgcgagcgtggaa
cttgacgatctgctacaggcgggcggcattgggttacttaatgccgtcgaacgctatgac
gccctacaaggaacggcatttacaacttacgcagtgcagcgtatccgtggcgctatgctg
gatgaacttcgcagccgtgactgggtgccgcgcagcgtgcgacgcaacgcgcgtgaagtg
gcacaggcaatagggaaactggagcaggaacttggccgcaacgccacggaaactgaggta
gcggaacgtttagggatcgatattgccaattatcgtcaaatgctgctcgacaccaataac
agccagctcttctcctacgatgagtggcgcgaagagcacggcgatagcatcgaactggtt
actgatgatcatcagcgagaaaacccgctacaacaactgctggacagtaatctgcgccag
cgggtgatggaagctatcgaaacgttgccggagcgcgaaaaactggtattaaccctctat
taccaggaagagctgaatctcaaagagattggcgcggtgctggaggtcggggaatcgcgg
gtcagtcagttacacagccaggccattaaacggttacgcactaaactgggtaagttataa
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