Escherichia coli APEC O78 (APEC): APECO78_13545
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Entry
APECO78_13545 CDS
T02445
Symbol
rcsA
Name
(GenBank) colanic acid capsular biosynthesis activation protein A
KO
K07781
LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Pathway
ecoa02020
Two-component system
ecoa02024
Quorum sensing
ecoa02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
APECO78_13545 (rcsA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APECO78_13545 (rcsA)
02026 Biofilm formation - Escherichia coli
APECO78_13545 (rcsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoa03000
]
APECO78_13545 (rcsA)
Transcription factors [BR:
ecoa03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
APECO78_13545 (rcsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Motif
Other DBs
NCBI-ProteinID:
AGC87438
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All DBs
Position
2775151..2775774
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AA seq
207 aa
AA seq
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MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH
DASNSQHIKHIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI
LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI
KTHNKQVIYHVVRLTDNVTNGIFVNMR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgattattatggatttatgtagttacacccgactaggtttaaccgggtatctg
ttgagtagaggggttaaaaaaagagaaatcaacgacattgaaaccgttgatgaccttgcc
atagcttgtgattcacagcgcccttcagtggtgtttattaatgaggactgtttcatccat
gatgcttctaacagtcagcacatcaagcacatcattaatcaacatcccaatacgttattt
atcgtttttatggcaattgccaatgttcattttgatgaatatctattggtcagaaaaaat
ttattgatcagttctaaatcgattaaaccggaatctctcgacgatatccttggcgatatt
ctgaaaaaagagacaacgataacctcttttttaaatatgccgacgttatcattgagccga
accgaatcgagtatgttgcgaatgtggatggcaggtcagggaacgattcaaatctctgac
caaatgaatatcaaagccaagaccgtttcatcgcataaaggtaatattaaacgtaagatc
aaaacgcataataaacaggttatctaccatgtcgtccgactgacggataatgtgactaat
ggtatttttgtcaacatgcgctaa
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