Escherichia coli APEC O78 (APEC): APECO78_16110
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Entry
APECO78_16110 CDS
T02445
Name
(GenBank) glycine cleavage system transcriptional repressor
KO
K03567
glycine cleavage system transcriptional repressor
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Pathway
ecoa02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
APECO78_16110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoa03000
]
APECO78_16110
Transcription factors [BR:
ecoa03000
]
Prokaryotic type
Other transcription factors
Others
APECO78_16110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACT_6
ACT
ACT_4
Flg_hook
Motif
Other DBs
NCBI-ProteinID:
AGC87943
LinkDB
All DBs
Position
3345245..3345817
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AA seq
190 aa
AA seq
DB search
MTLSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAMLGEEFTFIMLLSGSWNA
ITLIESTLPLKGAELDLLIVMKRTTARPRPPMPASVWVQVDVADSPHLIERFTALFDAHH
MNIAELVSRTQPAENERAAQLHIQITAHSPASADAANIEQAFKALCTELNAQGSINVVNY
SQHDEQDGVK
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
ttgacactgtcatcgcaacattatctggtgatcactgcgttgggtgccgatcgccctgga
attgtgaacaccatcacccgtcatgtcagtagttgcggctgtaatattgaagacagtcgc
ctggcgatgctgggagaagagttcacgtttattatgctgctttccggttcatggaatgcc
attactctgattgaatcaacgttaccgttgaaaggtgccgaactggatcttttaatcgtg
atgaagcgcacgacggcgcgtccgcgtccgccaatgccagcatctgtctgggttcaggtc
gatgtggcagactccccgcatttaattgaacgcttcacagcacttttcgacgcgcatcat
atgaacattgcggagctggtgtcgcgcacgcaacctgctgaaaatgaacgggctgcgcag
ttgcatattcagataaccgcccacagccccgcatctgcggacgcagcaaatattgagcaa
gcgttcaaagccctatgtacagaactcaatgcacaaggcagtattaacgtcgtcaattat
tcccaacatgatgaacaggatggagttaagtaa
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