Escherichia coli APEC O78 (APEC): APECO78_16700
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Entry
APECO78_16700 CDS
T02445
Name
(GenBank) 23S rRNA pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecoa03009
]
APECO78_16700
Enzymes [BR:
ecoa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
APECO78_16700
Ribosome biogenesis [BR:
ecoa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
APECO78_16700
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
TruB_N
TTC3_9th
Motif
Other DBs
NCBI-ProteinID:
AGC88061
LinkDB
All DBs
Position
complement(3479565..3480545)
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AA seq
326 aa
AA seq
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MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVL
GGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALL
HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMT
AGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHM
AHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAP
IPQDMVELIEVMRADFEEHKDEVDWL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacgagtacagctcactgcaacggtgtccgaaaaccaactcggtcaacgctta
gatcaggctttggccgaaatgttcccggattattcacgttcgcgaataaaagaatggatc
ctcgaccagcgagtgctggttaacggcaaagtttgtgataagccgaaagaaaaagtattg
ggtggcgagcaggttgccatcaacgctgagattgaagaagaagcgcgttttgaaccgcag
gatatcccgctggatatcgtctatgaagatgaagacattattatcattaataaaccgcgc
gacctggtggtacatcctggcgcgggtaacccggatggcacggtactgaatgcgttgctt
cattactatccacccattgccgatgtaccgcgtgcgggcatcgtccatcgtctggataaa
gacaccactggcctgatggttgtggcaaaaaccgttccggctcagacgcgtttagtcgaa
tctttgcaacggcgtgaaattactcgtgagtatgaagcggtggcgattggtcatatgacc
gcaggtggcacggtggacgagccaatcagtcgccacccgaccaaacgtacccatatggcg
gtgcatccgatgggcaaaccagcggtgactcactatcgcatcatggaacacttccgtgtg
cacacgcgtctgcggttgcgtctggaaactggacgtacgcaccagatccgcgtgcatatg
gcccatatcactcatccgctggtgggcgatccggtttatggtggccgtccgcgtccgcca
aaaggtgcttcggaagcatttatctccacgctgcgtaagtttgaccgccaggcgctacat
gcaaccatgctgcgtctttatcacccgatctccggcatcgaaatggaatggcatgcgcct
attccacaagatatggtggagctgattgaggtgatgcgcgccgatttcgaagaacataag
gatgaagtggactggttatga
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