Escherichia coli APEC O78 (APEC): APECO78_18185
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Entry
APECO78_18185 CDS
T02445
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecoa03036
]
APECO78_18185
Chromosome and associated proteins [BR:
ecoa03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
APECO78_18185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF2064
Motif
Other DBs
NCBI-ProteinID:
AGC88356
LinkDB
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Position
complement(3782923..3783819)
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AA seq
298 aa
AA seq
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MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLA
ERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVER
LLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVP
LGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaggatctggcacgcatcgagcagtttcttgatgctctgtggctggaaaaaaat
ctggctgaaaatacgttgaacgcttaccgtcgcgatctgtcaatgatggtggagtggttg
catcaccgcgggttgacgctggcgacggcgcaaagtgacgatttgcaggcattactggca
gaacggctggagggcgggtataaagccaccagctcagcgcgtttgctgagtgcagtgcgc
cgattgttccagtatctttatcgcgaaaagtttcgtgaagacgatcccagtgcgcatctc
gcttcaccgaaattgccccagcgtttgccaaaagatttaagcgaagcgcaggttgaacgt
ttattacaggcaccattaattgatcagccactggagctacgcgataaagccatgcttgaa
gtgttgtatgctaccgggctgcgtgtctctgaactggtcggactgacaatgagtgatatc
agcctgcgtcagggcgtagtgcgggtcattggtaaaggcaacaaagagcgcctggtaccg
ttaggtgaagaggcggtttactggctggaaacctatctggaacatgggcgtccgtggctg
ctgaatggtgtgtcaattgacgtgttgtttcccagccagcgtgcgcagcagatgacgcga
cagaccttctggcaccgcattaaacattatgctgtgctggcgggtatcgacagcgaaaag
ctgtcaccgcatgtgttgcgtcacgcttttgccacccatttattaaatcatggtgcggat
ttacgcgtggtgcagatgctactgggccacagcgacctctccaccacgcaaatttatacg
catgtcgctaccgagcgtctgcggcaacttcatcaacagcatcacccgcgggcgtga
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