Escherichia coli APEC O78 (APEC): APECO78_19180
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Entry
APECO78_19180 CDS
T02445
Name
(GenBank) DNA-binding transcriptional repressor EbgR
KO
K12113
LacI family transcriptional regulator, ebg operon repressor
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoa03000
]
APECO78_19180
Transcription factors [BR:
ecoa03000
]
Prokaryotic type
Helix-turn-helix
LacI family
APECO78_19180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AGC88553
LinkDB
All DBs
Position
3981458..3982441
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AA seq
327 aa
AA seq
DB search
MATLKDIAIEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEKLEYKTSSARKLQTGAV
NQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLGIELTNCYEHSGLPDIKNVTGILI
VGKPTPALRAAACALTDNICFIDFHEPGSGYDAVDIDLARISKEIIDFYINQGVNRIGFI
GGEDEPGKADIREVAFAEYGRLKQVVREEDIWRGGFSSSSGYELAKQLLAQEDYPKALFV
ASDSIAIGVLRAIHERGLNIPQDISLISVNDIPTARFTFPPLSTVRIHSEMMGSQGVNLV
YEKARDGRALPLLVFVPSKLKLRGTTR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcaacactaaaagacatcgcaatcgaagctggcgtatccctggcgacagtatccagg
gtcttaaatgacgatccgacattgaatgtgaaagaagagacgaaacatcgcattctcgag
atcgccgaaaagctggagtacaagaccagtagtgcccgtaaactccagacaggcgcagtc
aaccaacaccatattctggctatctacagctaccaacaggagctggagatcaacgatcct
tactatctggcgatccgccacggcattgaaactcagtgcgaaaagctgggcattgagctc
accaactgttatgaacacagcggattaccagacattaaaaacgtcaccggtattttaatt
gtcggcaaacccacgcccgccctgcgcgccgccgcctgtgcgttgaccgacaatatctgt
tttatcgactttcacgaacccggcagcggttacgatgcggtggatatcgatctggcacgc
atcagtaaagaaatcatcgacttctatatcaatcagggcgttaatcgtattggttttatt
ggcggtgaagatgagccaggcaaagcggatattcgtgaggtcgcctttgcggaatatggc
cgactgaaacaagtggtacgcgaagaggatatctggcgcggaggcttttccagttcgtcg
ggctatgaactggcaaaacagctgctggcgcaggaagactatccgaaggcactgtttgtt
gcttctgattccattgctatcggcgtactgcgggcaattcatgaacgtggcctgaacatc
ccacaggatatttcgcttatcagcgttaacgatatccccaccgcgcgatttacctttccg
ccgctctccaccgtgcgcatccattccgagatgatgggaagtcagggcgttaacctggtg
tatgaaaaagcccgcgatggtcgcgcgctgccgctgttggtcttcgttcccagcaaatta
aaactgcgcggcacgacccgttaa
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