Escherichia coli APEC O78 (APEC): APECO78_22880
Help
Entry
APECO78_22880 CDS
T02445
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Pathway
ecoa00300
Lysine biosynthesis
ecoa00470
D-Amino acid metabolism
ecoa01100
Metabolic pathways
ecoa01110
Biosynthesis of secondary metabolites
ecoa01120
Microbial metabolism in diverse environments
ecoa01230
Biosynthesis of amino acids
Module
ecoa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
APECO78_22880
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
APECO78_22880
Enzymes [BR:
ecoa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
APECO78_22880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AGC89293
LinkDB
All DBs
Position
4758215..4759039
Genome browser
AA seq
274 aa
AA seq
DB search
MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcgaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcaccggagctgattcgtcgcctggcggatcggcacctgggggta
gggtttgaccagctgctggtggttgagccgccgtatgatcctgaactggattttcactat
cgcattttcaatgctgatggcagtgaagtggcgcagtgcggcaacggtgcgcgctgcttt
gcccgttttgtgcgcctgaaagggcttaccaataagcgcgatatccgcgtcagcaccgcc
aacgggcggatggttctgaccgtcaccgatgatgatttggtccgcgtaaatatgggcgaa
cccaacttcgaaccttccgctgtgccgtttcgcgctaacaaagcggaaaagacctatatt
atgcgcgccgccgagcagacaatcttatgcggcgtggtgtcgatgggaaatccgcattgc
gtgattcaggtcgatgatgtcgataccgcggcggtagaaacgcttggtcctgttctggaa
agccacgagcgttttccggagcgagccaatatcggttttatgcaagtggttaagcgcgag
catattcgtttacgcgtttatgagcgtggggcaggagaaacccaggcctgcggcagcggc
gcgtgtgcggcggttgcagtagggattcagcaaggtttgctggccgaagaagtacgcgtg
gaactccccggcggtcgtcttgatatcgcctggaaaggtccgggtcacccgttatatatg
actggcccggcggtacatgtctacgacggatttattcatctatga
DBGET
integrated database retrieval system