| Entry |
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| Name |
(GenBank) ATP-dependent DNA helicase RecQ
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| KO |
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| Organism |
ecob Escherichia coli B C3029
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ecob00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C3029_00635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ecob03019]
C3029_00635
03400 DNA repair and recombination proteins [BR:ecob03400]
C3029_00635
Enzymes [BR:ecob01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3029_00635
Messenger RNA biogenesis [BR:ecob03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C3029_00635
DNA repair and recombination proteins [BR:ecob03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C3029_00635
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
126205..128034
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| AA seq |
609 aa
MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIP
ALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLY
IAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMAL
TATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSKGISAAAYHAGLENNIRVDVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIAL
STIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLG
LVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLR
KLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIR
AHVDGDDEE |
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| NT seq |
1830 nt +upstreamnt +downstreamnt
gtggcgcaggcggaagtgttgaatctggagtccggggctaaacaggttttacaagaaacc
tttggctaccaacagtttcgccccggccaggaagaaattatcgacactgtgctttccggc
cgcgattgcctcgtcgtcatgcccactggtggcggaaaatccctttgctatcaaatccct
gccttattgctaaacggccttaccgtggttgtttcaccgctgatttccttgatgaaagat
caggtggatcaactgcaagccaacggcgtggcggcggcgtgccttaactcgacgcaaacc
cgcgagcagcaacttgaagttatgacaggctgtcgcaccgggcaaatccgcctgctttat
atcgcgccggaacgcctgatgctggataactttcttgagcatctggcgcactggaatccg
gtgttattagccgttgatgaagcgcactgtatctcccaatggggccacgatttccgcccg
gaatacgctgccctcggtcagctgcgtcagcggttcccgacgctcccgtttatggcgctg
actgccacagccgatgacaccacgcggcaggatatcgtgcgcctgctggggctgaacgat
ccgctgattcaaatcagcagttttgatcgcccgaacattcgctacatgctgatggagaaa
ttcaaaccgctcgatcagttgatgcgctacgtgcaggaacaacgcggtaagtcggggatt
atttactgcaacagccgggcgaaagtagaagacaccgctgcgcgcctgcaaagcaaggga
attagcgcggcggcctatcatgccgggctggaaaataatattcgcgtcgacgtgcaggaa
aaatttcagcgcgatgacctgcaaattgtggtggcgaccgtggcgtttggcatgggcatc
aacaagcctaacgtccgcttcgtggtccactttgatattccgcgcaatatcgaatcctat
tatcaggaaaccggtcgcgccgggcgtgatggcctgcccgcggaagcgatgctgttttac
gatccggccgatatggcgtggctacgccgttgtctggaagagaagccgcaggggcaattg
caggatatcgagcgccataaactcaatgcgatgggcgcgtttgccgaagcgcaaacttgc
cgtcgtctggtgctgctgaactactttggcgaagggcggcaggagccgtgcgggaactgc
gatatctgcctcgatccgccgaaacaatacgatggttcaaccgatgctcagattgccctt
tccaccattggtcgtgtgaatcagcggtttgggatgggttatgtggtggaagtgattcgt
ggcgctaataaccagcgtatccgcgactatggtcatgacaaactgaaagtctatggcatg
ggccgtgataaaagccatgaacattgggtgagcgtgatccgccagctgattcacctcggc
ctggtgacgcaaaatattgcccagcattctgccctacaactgacagaggctgcgcgtccg
gtgctgcgcggcgaatcctctttgcaacttgccgtgccgcgtatcgtggcgctcaaaccg
aaagcgatgcagaaatcgttcggcggcaactatgatcgcaaactgttcgccaaattacgc
aaactgcgtaaatcgattgccgatgaaagcaatgtcccgccgtacgtggtatttaacgac
gcaaccttgattgagatggcggaacagatgccgatcactgccagcgaaatgctcagcgtt
aacggcgttgggatgcgcaagctggaacgctttggcaaaccgtttatggcgctgattcgt
gcgcatgtcgatggcgacgacgaagagtag |
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