Escherichia coli B C3029: C3029_01020
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Entry
C3029_01020 CDS
T09610
Name
(GenBank) DeoR family transcriptional regulator
KO
K27243
DeoR family transcriptional regulator, sulfoquinovose operon repressor
Organism
ecob
Escherichia coli B C3029
Brite
KEGG Orthology (KO) [BR:
ecob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecob03000
]
C3029_01020
Transcription factors [BR:
ecob03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
C3029_01020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
MarR_2
HVO_A0114
MarR
HTH_Crp_2
HTH_20
GntR
HVO_A0261_N
HTH_29
HTH_24
HTH_5
Fe_dep_repress
HTH_Mga
Rrf2
TrmB
DDRGK
RPA_C
HTH_28
SgrR_N
HTH_17
TFIIE_alpha
HTH_36
HTH_27
WHD_RNase_R
MerR
CoA_trans
Sugar-bind
YfeC-like
HTH_71
Sigma70_r4
HTH_IclR
Ribosomal_L19e
PaaX
Mga
DnaD_N
Motif
Other DBs
NCBI-ProteinID:
AMH24709
LinkDB
All DBs
Position
208730..209515
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AA seq
261 aa
AA seq
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MSLTELTGNPRHDQLLMLIAERGYMNIDELANLLDVSTQTVRRDIRKLSEQGLITRHHGG
AGRASSVVNTAFEQREVSQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARALLNHNH
LRIITNSLRVAHILYHNPRFEVMVPGGTLRSHNSGIIGPSAASFVADFRADYLVTSVGAI
ESDGALMEFDVNEANVVKTMMAHARNILLVADHTKYHASAAVEIGNVAQVTALFTDELPP
AALKSRLQDSQIEIILPQEDA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagccttaccgaactaaccggtaacccgcggcacgaccaactcctcatgctgatcgcc
gagcgtgggtatatgaatattgatgagctggcaaatctgctggatgtctccacgcagacg
gtccgccgggatattcgtaaattaagcgagcaaggcctgattacgcgccatcacggtggc
gcgggtcgggcttccagcgtcgttaatacggcgttcgagcagcgtgaggtttcgcaaacc
gaggaaaaaaaagcgattgccgaagcggtggcagactatattcctgatggttcaacaata
tttatcaccattggtacgactgttgagcatgttgcccgggcgttacttaaccataatcat
ttgcggataatcaccaacagcctgcgtgtggcgcatattctttaccacaacccgcgcttt
gaagtgatggtgcccggcggtacgttgcgctctcataatagcgggatcattggcccttca
gcggcgtcctttgtggctgattttcgtgctgattatctggtaacaagcgttggggcgatt
gagagcgatggcgcgttgatggagtttgatgtaaacgaagctaacgtggtgaaaacgatg
atggcgcacgcgagaaatattctgctggtcgccgatcacactaagtatcatgcttcggcg
gcggttgaaattggtaacgtggcacaggtcactgcgctctttaccgacgagctgccgccc
gctgcgctaaaatcacgcttacaagacagccaaattgaaatcattcttccccaggaagac
gcgtag
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