Escherichia coli B C3029: C3029_17265
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Entry
C3029_17265 CDS
T09610
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ecob
Escherichia coli B C3029
Pathway
ecob00250
Alanine, aspartate and glutamate metabolism
ecob00310
Lysine degradation
ecob00350
Tyrosine metabolism
ecob00650
Butanoate metabolism
ecob00760
Nicotinate and nicotinamide metabolism
ecob01100
Metabolic pathways
ecob01120
Microbial metabolism in diverse environments
Module
ecob_M00027
GABA (gamma-Aminobutyrate) shunt
ecob_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
ecob00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
C3029_17265 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
C3029_17265 (gabD)
00310 Lysine degradation
C3029_17265 (gabD)
00350 Tyrosine metabolism
C3029_17265 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
C3029_17265 (gabD)
Enzymes [BR:
ecob01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
C3029_17265 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
C3029_17265 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
C3029_17265 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AMH27658
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Position
3451783..3453231
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AA seq
482 aa
AA seq
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MKLNDSKLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRA
LPAWRALTAKERANILRNWFNLLMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALSSKFRNAGQTCVCANRLYVQDG
VYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA
DERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaacgacagtaaattattccgccagcaggcgttgattaacggggaatggctg
gacgccaacaatggcgaggtcatcgatgtcaccaatccggcgaacggcgacaagctgggt
agcgtacccaaaatgggcgctgatgaaacccgcgccgctatcgacgccgccaaccgcgct
ctgcccgcctggcgtgcgctcaccgccaaagaacgcgccaacattctgcgcaactggttc
aatttgttgatggagcatcaggacgatttagcgcgcctgatgaccctagaacagggcaaa
ccgctggctgaagcgaaaggcgaaattagctacgccgcctcctttattgagtggtttgct
gaagaaggcaaacgcatttatggcgacaccattcctggtcatcaggccgataagcgcctg
attgttatcaagcagccgattggcgtcaccgcagctatcacgccgtggaacttcccggcg
gcgatgattacccgcaaagccggtccggcgctggcggcaggctgcaccatggtgctgaag
cctgccagtcagacgccgttctctgcgctggcgctggcggagctggcgattcgcgcgggc
attccggctggggtatttaacgtggtcaccggttcggcgggcgcggtgggtaacgaactg
accagcaacccgctggtgcgcaagctgtcgtttaccggttcgaccgaaattggccgccag
ttaatggaacagtgcgcgaaagacatcaaaaaagtgtcgctggagctgggcggcaacgcg
ccgtttatcgtctttgacgatgccgacctcgacaaagccgtggaaggtgcgctgtcctcg
aaattccgcaacgccgggcaaacctgcgtctgcgccaaccgtttatacgtgcaggacggc
gtgtatgaccgctttgccgaaaaattgcagcaggcggtgagcaaattgcacatcggcgac
gggctggagaaaggcgtcaccatcgggccgctgatcgatgaaaaagcggtagcaaaagtg
gaagagcatattgccgatgcgctggagaaaggtgcgcgtgtggtttgcggcggtaaagcg
gatgaacgcggcggcaacttcttccagccgaccattctggtggacgttccagccaacgcc
aaagtgtcgaaagaagagacgttcggccccctcgccccactgttccgttttaaagatgaa
gccgatgtgattgcgcaagccaatgacaccgagtttggccttgccgcctatttctacgcc
cgtgatttaagccgcgtcttccgcgtgggcgaagcgctggagtacggcatcgtcggcatc
aataccggcatcatttccaatgaagtggccccgttcggcggcattaaagcctcgggtctg
ggtcgtgaaggttcgaagtatggcatcgaagattacttagaaatcaaatatatgtgcatc
ggtctttaa
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