Escherichia coli K-12 C3026: C3026_03540
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Entry
C3026_03540 CDS
T09611
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ecoc
Escherichia coli K-12 C3026
Brite
KEGG Orthology (KO) [BR:
ecoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecoc03400
]
C3026_03540
Enzymes [BR:
ecoc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
C3026_03540
DNA repair and recombination proteins [BR:
ecoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
C3026_03540
Prokaryotic type
C3026_03540
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMH34018
UniProt:
P00914
Structure
PDB
PDBj
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Position
712705..714123
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AA seq
472 aa
AA seq
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MTTHLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMSPRQAELINAQLN
GLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERA
LRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGMPECVAAPKVRSSGS
IEPSPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQNGAGEYEQQRDFPAVEGTSRLSA
SLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLNELIWREFYRHLITYHPSLCKHRPFIA
WTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDW
REGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDHEGEFIRQWL
PELRDVPGKVVHEPWKWAQKAGVTLDYPQPIVEHKEARVQTLAAYEAARKGK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactg
gctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgc
cagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaat
gggctacaaatagcgcttgcggaaaaaggtattcctttattgttccgtgaagtggatgac
tttgtcgccagtgtcgaaatagttaaacaggtgtgcgcggaaaacagcgttacccacctg
ttttataactatcagtatgaagtgaatgagcgggcgcgggatgtggaagttgaaagagcg
ctgcgtaacgtggtgtgtgaaggatttgatgacagcgtgatcctgccgcctggcgcggtg
atgaccggtaatcacgagatgtacaaagtctttacgccttttaagaatgcctggctgaaa
cggctgcgggaagggatgccggagtgcgtcgctgcgccaaaagttcgtagtagcggatcg
atagagccctcgccatccattacgctgaattatcctcgtcagtctttcgatactgcgcat
tttccggtggaagaaaaagcggcgattgcgcaattacgccagttttgccagaacggtgcc
ggagaatatgagcaacaacgagattttccggcagtggaaggcaccagccgtttgtcggcc
agcctggcaacgggcgggttatcgcctcgccagtgcttgcatcgcttgttggctgaacag
ccgcaggcgctggacggtggggccggtagtgtctggcttaatgagctgatctggcgcgag
ttttaccgtcacctgataacgtatcacccctcgttgtgtaaacatcgtccatttattgcc
tggacggatcgtgtacagtggcagagcaatcccgcacatttacaggcctggcaggaaggc
aaaacgggatacccgattgttgatgccgctatgcgtcagcttaacagcactggctggatg
cataacaggctacggatgattacagccagttttctggtgaaagatttattgatcgactgg
cgcgaaggcgagcgatatttcatgtcgcagctgattgatggtgatttggcagccaataac
ggtggctggcagtgggccgcttcaaccggaaccgatgcagcgccgtattttcgtattttc
aacccgacaacccagggcgagaaatttgatcatgagggcgagtttatccgccagtggcta
ccggaactgcgcgatgtgccagggaaagtggtgcatgagccgtggaagtgggcgcagaaa
gcaggtgtgacgctggattatccgcaaccgatagtcgagcacaaagaagcgagagtacaa
acgttggcagcgtatgaggcggcgcggaaggggaaataa
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