Escherichia coli K-12 C3026: C3026_05250
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Entry
C3026_05250 CDS
T09611
Name
(GenBank) peptidase M15
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ecoc
Escherichia coli K-12 C3026
Pathway
ecoc00550
Peptidoglycan biosynthesis
ecoc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecoc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C3026_05250
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecoc01002
]
C3026_05250
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ecoc01011
]
C3026_05250
Enzymes [BR:
ecoc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C3026_05250
Peptidases and inhibitors [BR:
ecoc01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
C3026_05250
Peptidoglycan biosynthesis and degradation proteins [BR:
ecoc01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
C3026_05250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AMH37729
UniProt:
P08506
Structure
PDB
PDBj
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Position
1000662..1001864
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AA seq
400 aa
AA seq
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MTQYSSLLRGLAAGSAFLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADE
KLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVS
VADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQ
FSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTA
GAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQ
RVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTIDFQLNG
KSIEQRPLIVMENVEEGGFFGRVWDFVMMKFHQWFGSWFS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaatactcctctctccttcgtggtcttgcagcgggttctgcatttttattcctt
tttgccccaacggcattcgcggcggaacaaaccgttgaagcgccgagcgtggatgcgcgt
gcatggattttaatggattacgccagcggtaaagtgctggcagaaggcaatgcggatgag
aaactggatcccgcgagcctgactaaaatcatgaccagctatgtggttgggcaggcgctt
aaggccgataagattaaactcaccgatatggtgacggtcggtaaagatgcctgggcgacg
ggaaatccggcactgcgtggttcatcggtaatgttcctcaaaccgggcgatcaggtttcg
gtggcagacttgaacaaaggtgtgattatccagtccggtaatgacgcctgtattgcgctg
gctgattacgttgccgggagccaggagtcatttattggtctgatgaatggttatgccaaa
aaactgggtctgaccaacactaccttccagacggtgcacggcctggatgcgccggggcag
ttcagcaccgcgcgcgatatggcattgctgggtaaagcattgatccacgatgtgccggaa
gagtacgccattcataaagagaaagagttcaccttcaacaaaattcgtcagcctaaccgt
aaccgtctgctgtggagcagcaatctgaatgttgatggcatgaagacaggaaccacggca
ggcgcgggatataatctggttgcttcggctacccagggcgatatgcgtttaatctccgta
gtgttgggggcgaaaaccgaccgtatccgttttaatgagtctgagaaattattgacctgg
ggtttccgcttctttgaaaccgtgacgccaattaaacctgatgccacctttgtgactcag
cgcgtctggtttggtgataagagcgaagtgaatctcggggcaggtgaagcgggctcagtg
accataccgcgtgggcagctgaaaaacctgaaagcgagttatacgttaacggaaccgcag
cttaccgcaccgctgaaaaaaggtcaggttgtcgggaccattgatttccagcttaacggt
aaatccattgagcagcgtccgctgatcgtgatggaaaatgtggaagagggcggattcttt
ggtcgggtgtgggatttcgtgatgatgaaattccatcagtggttcggcagctggttctct
taa
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