Escherichia coli K-12 C3026: C3026_05585
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Entry
C3026_05585 CDS
T09611
Name
(GenBank) ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ecoc
Escherichia coli K-12 C3026
Brite
KEGG Orthology (KO) [BR:
ecoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecoc03009
]
C3026_05585
Ribosome biogenesis [BR:
ecoc03009
]
Prokaryotic type
ribosomal protein modification factors
C3026_05585
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AMH34370
UniProt:
P75838
Structure
PDB
PDBj
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Position
complement(1073928..1075688)
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AA seq
586 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNG
KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEG
LLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVS
NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLM
AIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGS
EWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQ
ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAA
SAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacatttatccccggcaaagatgccgctctggaagattccatcgctcgcttc
cagcaaaaactttcagacctcggctttcagattgaagaggcctcctggctgaatcccgtg
cctaacgtctggtctgtacatattcgcgacaaagagtgcgcactgtgttttaccaacggt
aaaggcgcaaccaagaaagcggcgctggcttctgcactcggtgaatatttcgagcgtctc
tcaaccaactacttttttgcggacttctggctgggcgaaaccatcgccaacggtccgttc
gtgcattatcccaacgaaaaatggttcccactgaccgaaaatgacgatgtgccagaaggg
ctgctcgatgaccgtctgcgcgcgttttatgatccggagaatgaactgaccggcagcatg
ctgattgacctacaatccggtaacgaagatcgtggtatttgcggcctgccgtttacgcgt
cagtccgacaatcagaccgtttatattccgatgaatatcattggtaacctgtacgtctcc
aacggtatgtccgcaggtaatacccgcaacgaagcacgcgttcagggattgtctgaagtt
ttcgaacgctacgtgaaaaaccgcattattgctgaaagcatcagcctgccagagatcccg
gcagacgtgctggcgcgttacccagcagtagttgaagccatcgaaacgctggaagcggag
ggtttcccaatcttcgcttatgacggttcgcttggcggccagtatccggtgatttgcgtg
gtactgttcaatcctgctaacggtacctgctttgcctctttcggtgcgcatcctgatttt
ggcgtagcactggaacgtaccgtgaccgagctgctgcaaggtcgtggcctgaaagatttg
gatgtgtttactccgccaaccttcgatgatgaagaagtcgctgaacataccaacctcgaa
acgcactttatcgattccagcggtttaatctcctgggacctgttcaagcaggatgccgat
tatccgtttgtggactggaatttctccggcaccacggaagaagagttcgccacactgatg
gctatcttcaacaaagaagataaagaagtttatattgccgattacgagcatctgggcgtt
tatgcttgccgtattatcgtgcctggcatgtccgatatttatccggctgaagatctgtgg
ctcgcgaataacagtatgggcagccatttacgtgaaacgattctttcgctaccaggcagc
gagtgggaaaaagaagattacctgaacctcatcgagcaactggatgaagaaggttttgat
gactttacccgcgtgcgtgagctgttgggtctggcgaccgggtcggataacggttggtac
accctgcgtatcggtgaattaaaagccatgctggcgctggctggtggcgatctggaacag
gctctggtctggaccgaatggacgatggagtttaactcatcagtatttagtccggaacgc
gccaactattatcgctgcctgcaaacgttgttattactggcacaggaagaagatcgccag
ccgctgcaatatctgaatgcgtttgttcgcatgtacggcgcagatgccgtagaagccgcc
agtgcggcaatgagcggcgaagcggcgttttacggcctgcaaccggtagatagcgatctg
cacgcgtttgctgcacatcagtcgttgttgaaggcctacgaaaagctgcagcgcgccaaa
gcagcattctgggcaaaataa
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