Escherichia coli K-12 C3026: C3026_19120
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Entry
C3026_19120 CDS
T09611
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ecoc
Escherichia coli K-12 C3026
Brite
KEGG Orthology (KO) [BR:
ecoc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
C3026_19120
Enzymes [BR:
ecoc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
C3026_19120
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
CASP_dom
Motif
Other DBs
NCBI-ProteinID:
AMH36846
LinkDB
All DBs
Position
complement(3786439..3788394)
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AA seq
651 aa
AA seq
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MAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEA
ILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPA
NPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIAR
ELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLP
NKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRM
ILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL
TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQP
QVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQ
ERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAIL
RPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLA
QSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggtggcagccgttgtcctggtgttcgtttttattttttgcaccgttttgctg
ttccatctggtccagcagaatcgctataacacggctacgcaactggaaagcattgctcgc
tctgtccgcgaacccttatcttcagctattttgaaaggcgatattcccgaagcggaagct
attcttgccagcattaaaccggcaggcgtggtcagccgtgccgatgtagtgctgcctaac
cagttccaggcgctgcgtaaaagttttattccagagcgcccggtgccggtaatggttact
cgcctgtttgagctaccggttcaaatctcgctgggcgtttactcgctcgaacgtccggca
aacccgcagccaattgcctatctggtactacaggcggattccttccgtatgtataagttc
gtgatgagcaccctctcaacgttagtgaccatttacttacttttgtcgcttatcctgacc
gtcgccatcagctggtgcattaaccgcctgattttgcatccgttacgcaatattgctcgc
gaacttaacgccatcccagccaaggagcttgttggtcaccaactggcattaccgcgtctg
catcaggacgatgaaatcggtatgttggtgcgcagttacaacctcaaccagcaattgctg
cagcgccattatgaagaacagaacgaaaatgcgatgcgcttcccggtgtcggatttgccg
aacaaagccttgctgatggagatgctggagcaggttgtcgcgcgtaaacaaaccaccgcg
ctgatgatcatcacctgtgaaaccctgcgtgatactgcgggcgtgctgaaagaggcgcaa
cgagaaattctgctgctgacgctggtggaaaaactcaaatcggtactgtcgccacgtatg
atcctcgcgcagattagcggttatgactttgctgtcattgccaacggtgtacaggaaccg
tggcacgcaatcaccttaggtcagcaagtgctcactatcatgagcgagcgcctgccgatt
gaacgtattcaactccgtccgcactgtagcattggcgtggcgatgttctacggcgatctc
accgccgaacagctttacagtcgcgctatttctgcggcatttaccgctcgccataaaggc
aagaatcagattcagttctttgatccgcagcagatggaagccgcccagaagcggttgacg
gaagagagcgatatccttaatgcactggaaaatcatcagtttgctatttggttacagcca
caggtcgagatgaccagcggtaaactggtcagtgcggaagtgttactgcgtatccagcaa
ccggatggcagttgggacctgccggatggcttaatcgatcgcattgagtgctgtgggctg
atggttaccgtcggtcactgggtgctggaagagtcctgtcgattgcttgcagcctggcaa
gagcgcggcattatgctgcccttgtcggtaaacctctctgcgctgcaactgatgcacccg
aatatggtggcggatatgctggaactgttaacccgctatcgcattcagccgggaacactg
attctggaagtgacagaaagccgacgtattgacgaccctcatgctgcggtggcaatcctc
cgtccgctgcgcaatgccggagttcgggtggcgctggatgatttcggcatgggctacgca
gggctgcgtcagctgcagcatatgaaatcgttgccaatcgacgtactgaaaatcgacaaa
atgtttgttgaaggcttgccgggagatagcagcatgattgctgcaattatcatgctggcg
cagagcctgaacttacaaatgattgccgaaggcgtggagactgaagcacaacgcgactgg
ctggcaaaagcgggcgttggtattgcccagggcttcctttttgctcgcccactccctatt
gaaatcttcgaagagagttacctggaagaaaagtag
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